RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 RPN2P04844 631 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 OR56A5P0C7T3 313 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 NR1D1P20393 614 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 ARCN1P48444 511 aaKnown RBP14.3□□□□□ -0.12
HDAC6-204ENST00000376643 CCL11P51671 97 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 RPS18P62269 152 aaKnown RBP14.3□□□□□ -0.12
HDAC6-204ENST00000376643 IL10RAQ13651 578 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 BOP1Q14137 746 aaKnown RBP14.3□□□□□ -0.12
HDAC6-204ENST00000376643 NCF4Q15080 339 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 SYTL3Q4VX76 610 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 KCTD11Q693B1 232 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 SPESP1Q6UW49 350 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 PACS1Q6VY07 963 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 TBC1D21Q8IYX1 336 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 CPT1CQ8TCG5 803 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 PROKR1Q8TCW9 393 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 RNF31Q96EP0 1072 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 CDKN2AIPNLQ96HQ2 116 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 FER1L6-AS2Q96M78 137 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 TRAPPC9Q96Q05 1148 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 HGH1Q9BTY7 390 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 FRMD8P1Q9BZ68 369 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-204ENST00000376643 FAM96AQ9H5X1 160 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 PCMTD2Q9NV79 361 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 SMARCAL1Q9NZC9 954 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 GPN3Q9UHW5 284 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-204ENST00000376643 ASF1AQ9Y294 204 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 SOWAHDA6NJG2 315 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 CEACAM4O75871 244 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 DNAJB5O75953 348 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 ALPPP05187 535 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 ST6GAL1P15907 406 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 STIP1P31948 543 aaKnown RBP14.29□□□□□ -0.12
HDAC6-204ENST00000376643 PTGIRP43119 386 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 KIF5AQ12840 1032 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 FHL5Q5TD97 284 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 NLRP9Q7RTR0 991 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 LILRA3Q8N6C8 439 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-204ENST00000376643 C19orf47Q8N9M1 422 aaKnown RBP14.29□□□□□ -0.12
HDAC6-204ENST00000376643 FAM71DQ8N9W8 422 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 OR1L3Q8NH93 324 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 ADAMTS17Q8TE56 1095 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 ELMO1Q92556 727 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 SGSM3Q96HU1 749 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 TRIM55Q9BYV6 548 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 GPR83Q9NYM4 423 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 C5AR2Q9P296 337 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 NBASA2RRP1 2371 aa14.29□□□□□ -0.12
HDAC6-204ENST00000376643 CCDC78A2IDD5 438 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 HEATR9A2RTY3 570 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 BTN3A3O00478 584 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 PEX12O00623 359 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 OR2B3O76000 313 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 IPO13O94829 963 aaKnown RBP14.28□□□□□ -0.12
HDAC6-204ENST00000376643 MSNP26038 577 aaKnown RBP14.28□□□□□ -0.12
HDAC6-204ENST00000376643 LMAN1P49257 510 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 MLLT10P55197 1068 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 CDH17Q12864 832 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 ABRQ12979 859 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 OLIG2Q13516 323 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 SPARCL1Q14515 664 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 POU6F1Q14863 301 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 DBN1Q16643 649 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 ZNF658BQ4V348 819 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-204ENST00000376643 DNAJC21Q5F1R6 531 aaKnown RBP14.28□□□□□ -0.12
HDAC6-204ENST00000376643 AARS2Q5JTZ9 985 aaKnown RBP14.28□□□□□ -0.12
HDAC6-204ENST00000376643 TLDC1Q6P9B6 456 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 AFTPHQ6ULP2 937 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 FAM198BQ6UWH4 519 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 LRRC57Q8N9N7 239 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 DNAAF3Q8N9W5 541 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 GLIS1Q8NBF1 620 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 SLC38A9Q8NBW4 561 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 OR5K2Q8NHB8 316 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 TM9SF4Q92544 642 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 ALG3Q92685 438 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 PEX13Q92968 403 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 SLC22A18Q96BI1 424 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 RUFY1Q96T51 708 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 AP1M1Q9BXS5 423 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 AKIRIN1Q9H9L7 192 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-204ENST00000376643 LRRC4CQ9HCJ2 640 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 SLAMF7Q9NQ25 335 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 TXLNGQ9NUQ3 528 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 NDOR1Q9UHB4 597 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 RIMKLBQ9ULI2 386 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 TFR2Q9UP52 801 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 MRFAP1Q9Y605 127 aa14.28□□□□□ -0.12
HDAC6-204ENST00000376643 A0A0J9YY10 115 aa14.27□□□□□ -0.13
HDAC6-204ENST00000376643 GRID2IPA4D2P6 1211 aa14.27□□□□□ -0.13
HDAC6-204ENST00000376643 MROH6A6NGR9 719 aa14.27□□□□□ -0.13
HDAC6-204ENST00000376643 E7EVH7 732 aa14.27□□□□□ -0.13
HDAC6-204ENST00000376643 K7EM74 188 aa14.27□□□□□ -0.13
HDAC6-204ENST00000376643 ZNF749O43361 778 aa14.27□□□□□ -0.13
HDAC6-204ENST00000376643 PSMA3P25788 255 aa14.27□□□□□ -0.13
HDAC6-204ENST00000376643 FDFT1P37268 417 aa14.27□□□□□ -0.13
HDAC6-204ENST00000376643 PRKG2Q13237 762 aa14.27□□□□□ -0.13
HDAC6-204ENST00000376643 SSPNQ14714 243 aa14.27□□□□□ -0.13
HDAC6-204ENST00000376643 KIR2DS3Q14952 304 aa14.27□□□□□ -0.13
HDAC6-204ENST00000376643 ZNF789Q5FWF6 425 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms