RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 COL4A1P02462 1669 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 S1PR4O95977 384 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 IL6P05231 212 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 FGF3P11487 239 aaPredicted RBP17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 COPZ1P61923 177 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 MOGSQ13724 837 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 DHCR24Q15392 516 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 MINDY4Q4G0A6 757 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 CHMP1BQ7LBR1 199 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 OR52J3Q8NH60 311 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 SLC32A1Q9H598 525 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 ENO2P09104 434 aaPredicted RBP17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 SLC35E2BP0CK96 405 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 ERVK-8P63133 956 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 GNA13Q14344 377 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 ZNF789Q5FWF6 425 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 TSPAN33Q86UF1 283 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 TCEAL8Q8IYN2 117 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 PARP8Q8N3A8 854 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 FAM47BQ8NA70 645 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 PHC3Q8NDX5 983 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 MYLIPQ8WY64 445 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 KCNJ9Q92806 393 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 NUSAP1Q9BXS6 441 aaKnown RBP17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 TBC1D23Q9NUY8 699 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 SIRPGQ9P1W8 387 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 TPRKBQ9Y3C4 175 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 SMCHD1A6NHR9 2005 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 SMAD6O43541 496 aaKnown RBP17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 PAICSP22234 425 aaKnown RBP17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 TMEM115Q12893 351 aaPredicted RBP17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 NCF4Q15080 339 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 DPY19L2P1Q6NXN4 242 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 KLHL35Q6PF15 583 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 ADAMTS15Q8TE58 950 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 SMIM14Q96QK8 99 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 PRRG3Q9BZD7 231 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 CSNK1G1Q9HCP0 422 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 ARHGEF3Q9NR81 526 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 A0A087WXM4 84 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 CHRM1P11229 460 aaPredicted RBP17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 SIM2Q14190 667 aaPredicted RBP17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 ITPRIPL2Q3MIP1 535 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 GALNT5Q7Z7M9 940 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 DEFB119Q8N690 84 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 SLC47A1Q96FL8 570 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 CCM2Q9BSQ5 444 aa17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 MRPS17Q9Y2R5 130 aaKnown RBP17.61■□□□□ 0.41
PTPDC1-202ENST00000375360 SERPINB7O75635 380 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 ZNF30P17039 623 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 CMPK1P30085 196 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 CHN2P52757 468 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 C1QTNF8P60827 252 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 C1DQ13901 141 aaKnown RBP17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 EIF3MQ7L2H7 374 aaKnown RBP17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 PCDH10Q9P2E7 1040 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 KNTC1P50748 2209 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 GRXCR1A8MXD5 290 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 PRPS2P11908 318 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 ADSLP30566 484 aaPredicted RBP17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 STX4Q12846 297 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 RTN4RL1Q86UN2 441 aaPredicted RBP17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 LRRTM4Q86VH4 590 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 CHST14Q8NCH0 376 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 OLFM1Q99784 485 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 DYTNA2CJ06 578 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 KLF11O14901 512 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 PEX2P28328 305 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 LRRC32Q14392 662 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 RNF168Q8IYW5 571 aaPredicted RBP17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 TBC1D21Q8IYX1 336 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 FAM46DQ8NEK8 389 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 SEC14L3Q9UDX4 400 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 RUVBL1Q9Y265 456 aaKnown RBP17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 SLC9A8Q9Y2E8 581 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 RNF11Q9Y3C5 154 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 SOCS5O75159 536 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 RB1P06400 928 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 LEPRP48357 1165 aaKnown RBP17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 HKDC1Q2TB90 917 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 FRG2Q64ET8 278 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 AGTRAPQ6RW13 159 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 TSTD1Q8NFU3 115 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 FRG2BQ96QU4 278 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 DERL2Q9GZP9 239 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 C3orf14Q9HBI5 128 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 MAGEE1Q9HCI5 957 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 TAC3Q9UHF0 121 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 PLAGL1Q9UM63 463 aa17.6■□□□□ 0.41
PTPDC1-202ENST00000375360 A0A1W2PP55 124 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 DNAJA2O60884 412 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 TULP3O75386 442 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 SLC6A4P31645 630 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 AKT2P31751 481 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 RPL26P61254 145 aaKnown RBP17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 CYP4F3Q08477 520 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 PPP1R8Q12972 351 aaKnown RBP17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 SMYD5Q6GMV2 418 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 LINC01465Q8N7H1 131 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms