RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ALKBH1Q13686 389 aaKnown RBP8.86□□□□□ -0.99
UBR4-201ENST00000375218 R3HDM1Q15032 1099 aaKnown RBP8.86□□□□□ -0.99
UBR4-201ENST00000375218 UBAP2Q5T6F2 1119 aaKnown RBP8.86□□□□□ -0.99
UBR4-201ENST00000375218 HMBOX1Q6NT76 420 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 FAM122BQ7Z309 247 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 TIPARPQ7Z3E1 657 aaKnown RBP8.86□□□□□ -0.99
UBR4-201ENST00000375218 MCOLN2Q8IZK6 566 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 THAP4Q8WY91 577 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 RASD2Q96D21 266 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 FEM1AQ9BSK4 669 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 CBX8Q9HC52 389 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 OXSMQ9NWU1 459 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 STMN3Q9NZ72 180 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 SLC12A7Q9Y666 1083 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 WDR33Q9C0J8 1336 aaKnown RBP8.85□□□□□ -0.99
UBR4-201ENST00000375218 FBLL1A6NHQ2 334 aaKnown RBP8.85□□□□□ -0.99
UBR4-201ENST00000375218 RNF225M0QZC1 329 aaPredicted RBP8.85□□□□□ -0.99
UBR4-201ENST00000375218 PIK3R2O00459 728 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 ZNF208O43345 1280 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 DLX3O60479 287 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 ADAP1O75689 374 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 AGXTP21549 392 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 NT5EP21589 574 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 CASP3P42574 277 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 BCAT1P54687 386 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 RPS6KA1Q15418 735 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 SLC5A12Q1EHB4 618 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 KIAA1324Q6UXG2 1013 aaKnown RBP8.85□□□□□ -0.99
UBR4-201ENST00000375218 UNC5BQ8IZJ1 945 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 TP53I13Q8NBR0 393 aaPredicted RBP8.85□□□□□ -0.99
UBR4-201ENST00000375218 CACNG8Q8WXS5 425 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 EDAQ92838 391 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 RIOX1Q9H6W3 641 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 KAT14Q9H8E8 782 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 SLC38A10Q9HBR0 1119 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 DNPEPQ9ULA0 475 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 WNT10BO00744 389 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 LPXNO60711 386 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 AZGP1P25311 298 aaKnown RBP8.85□□□□□ -0.99
UBR4-201ENST00000375218 GRK4P32298 578 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 GPD2P43304 727 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 SNAP25P60880 206 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 BTBD8Q5XKL5 378 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 LRRC70Q7Z2Q7 622 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 SLAMF9Q96A28 289 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 ZNF558Q96NG5 402 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 GPR87Q9BY21 358 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 TMEM39BQ9GZU3 492 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 SLC22A4Q9H015 551 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 PLA2G4CQ9UP65 541 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 LYVE1Q9Y5Y7 322 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 RNF215Q9Y6U7 377 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 TMEM63AO94886 807 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 OR6B1O95007 311 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 HTR3BO95264 441 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 NSA2O95478 260 aaKnown RBP8.85□□□□□ -0.99
UBR4-201ENST00000375218 CALCAP01258 141 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 DRD2P14416 443 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 TNNI1P19237 187 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 RAB4AP20338 218 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 CCND3P30281 292 aaPredicted RBP8.85□□□□□ -0.99
UBR4-201ENST00000375218 ARL1P40616 181 aaPredicted RBP8.85□□□□□ -0.99
UBR4-201ENST00000375218 RIDAP52758 137 aaKnown RBP8.85□□□□□ -0.99
UBR4-201ENST00000375218 SPOUT1Q5T280 376 aaKnown RBP8.85□□□□□ -0.99
UBR4-201ENST00000375218 ZNF470Q6ECI4 717 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 C19orf47Q8N9M1 422 aaKnown RBP8.85□□□□□ -0.99
UBR4-201ENST00000375218 MCOLN3Q8TDD5 553 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 WFIKKN2Q8TEU8 576 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 CMTM6Q9NX76 183 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 ADAM21Q9UKJ8 722 aa8.85□□□□□ -0.99
UBR4-201ENST00000375218 PPIEQ9UNP9 301 aaKnown RBP8.85□□□□□ -0.99
UBR4-201ENST00000375218 TRPM7Q96QT4 1865 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 VPS37CA5D8V6 355 aaPredicted RBP8.84□□□□□ -0.99
UBR4-201ENST00000375218 K7EQM0 130 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 FOXE1O00358 373 aaPredicted RBP8.84□□□□□ -0.99
UBR4-201ENST00000375218 RNF13O43567 381 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 DDAH2O95865 285 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 APOA1P02647 267 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 CXCR5P32302 372 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 LTBRP36941 435 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 MAGEA11P43364 429 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 FASTKD3Q14CZ7 662 aaKnown RBP8.84□□□□□ -0.99
UBR4-201ENST00000375218 ALS2CLQ60I27 953 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 FAM129CQ86XR2 697 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 MISPQ8IVT2 679 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 SNX19Q92543 992 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 P3H4Q92791 437 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 MYO19Q96H55 970 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 ZNF607Q96SK3 696 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 ASCL2Q99929 193 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 REEP2Q9BRK0 252 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 BTBD1Q9H0C5 482 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 TOR3AQ9H497 397 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 KCNK12Q9HB15 430 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 SMARCAL1Q9NZC9 954 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 AMFRQ9UKV5 643 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 WASH4PA8MWX3 477 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 MYO1GB0I1T2 1018 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 TLX2O43763 284 aaPredicted RBP8.84□□□□□ -0.99
UBR4-201ENST00000375218 SCN2BO60939 215 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms