RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 GPRIN3Q6ZVF9 776 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 ARPINQ7Z6K5 226 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 GALNT4Q8N4A0 578 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 OR6K2Q8NGY2 324 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 ESAMQ96AP7 390 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 GABRG3Q99928 467 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 GPATCH1Q9BRR8 931 aaKnown RBP15.24■□□□□ 0.03
CCDC40-202ENST00000374876 CENPKQ9BS16 269 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 EFHD1Q9BUP0 239 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 TMEM245Q9H330 911 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 PCDHB1Q9Y5F3 818 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 AP4B1Q9Y6B7 739 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 ASLP04424 464 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 CAPNS1P04632 268 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 SLC7A1P30825 629 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 DIO3P55073 304 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 ST8SIA6P61647 398 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 ENPP2Q13822 863 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 PTRHD1Q6GMV3 140 aaKnown RBP15.24■□□□□ 0.03
CCDC40-202ENST00000374876 BLOC1S3Q6QNY0 202 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 FAM151BQ6UXP7 276 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 CAMK1DQ8IU85 385 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 MINDY1Q8N5J2 469 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 EID2BQ96D98 161 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 CLPBQ9H078 707 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 NUDT4Q9NZJ9 180 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 ZNF225Q9UK10 706 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 DHRS7Q9Y394 339 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 GPR45Q9Y5Y3 372 aa15.24■□□□□ 0.03
CCDC40-202ENST00000374876 E2F3O00716 465 aa15.23■□□□□ 0.03
CCDC40-202ENST00000374876 PRR35P0CG20 571 aa15.23■□□□□ 0.03
CCDC40-202ENST00000374876 ZNF7P17097 686 aaPredicted RBP15.23■□□□□ 0.03
CCDC40-202ENST00000374876 ARL1P40616 181 aaPredicted RBP15.23■□□□□ 0.03
CCDC40-202ENST00000374876 BCL2L1Q07817 233 aa15.23■□□□□ 0.03
CCDC40-202ENST00000374876 XKR7Q5GH72 579 aa15.23■□□□□ 0.03
CCDC40-202ENST00000374876 COQ5Q5HYK3 327 aa15.23■□□□□ 0.03
CCDC40-202ENST00000374876 PRSS33Q8NF86 280 aa15.23■□□□□ 0.03
CCDC40-202ENST00000374876 PIH1D2Q8WWB5 315 aa15.23■□□□□ 0.03
CCDC40-202ENST00000374876 LRTOMTQ8WZ04 291 aa15.23■□□□□ 0.03
CCDC40-202ENST00000374876 DUS3LQ96G46 650 aaKnown RBP15.23■□□□□ 0.03
CCDC40-202ENST00000374876 SLC6A17Q9H1V8 727 aa15.23■□□□□ 0.03
CCDC40-202ENST00000374876 SEMA6AQ9H2E6 1030 aa15.23■□□□□ 0.03
CCDC40-202ENST00000374876 ZFYVE1Q9HBF4 777 aa15.23■□□□□ 0.03
CCDC40-202ENST00000374876 PRMT8Q9NR22 394 aaPredicted RBP15.23■□□□□ 0.03
CCDC40-202ENST00000374876 RIC8BQ9NVN3 520 aa15.23■□□□□ 0.03
CCDC40-202ENST00000374876 RAPGEFL1Q9UHV5 662 aa15.23■□□□□ 0.03
CCDC40-202ENST00000374876 TSR3Q9UJK0 312 aaKnown RBP15.23■□□□□ 0.03
CCDC40-202ENST00000374876 SLC25A13Q9UJS0 675 aa15.23■□□□□ 0.03
CCDC40-202ENST00000374876 CNOT11Q9UKZ1 510 aaKnown RBP15.23■□□□□ 0.03
CCDC40-202ENST00000374876 SNX13Q9Y5W8 968 aa15.23■□□□□ 0.03
CCDC40-202ENST00000374876 TCRBV21S2A2A0A5A6 115 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 NME4O00746 187 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 NPC1O15118 1278 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 SMAD6O43541 496 aaKnown RBP15.22■□□□□ 0.03
CCDC40-202ENST00000374876 PRAMEF1O95521 474 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 S100BP04271 92 aaPredicted RBP15.22■□□□□ 0.03
CCDC40-202ENST00000374876 SRPRAP08240 638 aaKnown RBP15.22■□□□□ 0.03
CCDC40-202ENST00000374876 KCNK10P57789 538 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 SCIMPQ6UWF3 145 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 ADAMTSL2Q86TH1 951 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 SERPINA9Q86WD7 417 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 CDYL2Q8N8U2 506 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 TSTD1Q8NFU3 115 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 OR2T34Q8NGX1 318 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 OR2T3Q8NH03 318 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 HMGB4Q8WW32 186 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 SLCO4A1Q96BD0 722 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 LRRC58Q96CX6 371 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 PDLIM5Q96HC4 596 aaKnown RBP15.22■□□□□ 0.03
CCDC40-202ENST00000374876 CNBD2Q96M20 576 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 ZNF382Q96SR6 550 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 CCT7Q99832 543 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 TRIM15Q9C019 465 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 AIG1Q9NVV5 245 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 ABCD2Q9UBJ2 740 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 EVLQ9UI08 416 aaPredicted RBP15.22■□□□□ 0.03
CCDC40-202ENST00000374876 ASB1Q9Y576 335 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 C1orf232A0A0U1RR37 186 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.22■□□□□ 0.03
CCDC40-202ENST00000374876 AP1G1O43747 822 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 SYNCRIPO60506 623 aaKnown RBP15.22■□□□□ 0.03
CCDC40-202ENST00000374876 OR4F21O95013 312 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 NNMTP40261 264 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 GRIA3P42263 894 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 DGKEP52429 567 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 FOXM1Q08050 763 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 TCF15Q12870 199 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 GRIK2Q13002 908 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 CAPRIN1Q14444 709 aaKnown RBP15.22■□□□□ 0.03
CCDC40-202ENST00000374876 TSPEARQ8WU66 669 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 PPWD1Q96BP3 646 aaKnown RBP15.22■□□□□ 0.03
CCDC40-202ENST00000374876 PLEKHG4BQ96PX9 1271 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 ASB8Q9H765 288 aa15.22■□□□□ 0.03
CCDC40-202ENST00000374876 POLMQ9NP87 494 aaPredicted RBP15.22■□□□□ 0.03
CCDC40-202ENST00000374876 TNPO3Q9Y5L0 923 aaKnown RBP15.22■□□□□ 0.03
CCDC40-202ENST00000374876 DMDP11532 3685 aa15.21■□□□□ 0.03
CCDC40-202ENST00000374876 A0A1W2PP18 115 aa15.21■□□□□ 0.03
CCDC40-202ENST00000374876 ZNF839A8K0R7 811 aa15.21■□□□□ 0.03
CCDC40-202ENST00000374876 BNIP3LO60238 219 aa15.21■□□□□ 0.03
CCDC40-202ENST00000374876 SP9P0CG40 484 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms