RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 ATG16L2Q8NAA4 619 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 KDM1BQ8NB78 822 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 ATAD1Q8NBU5 361 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 FBXL13Q8NEE6 735 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 SCAMP5Q8TAC9 235 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 SLC2A12Q8TD20 617 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 CPT1BQ92523 772 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 MYLPFQ96A32 169 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 URB1-AS1Q96HZ7 61 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 SEPT5Q99719 369 aaPredicted RBP4.53□□□□□ -1.68
PMS1-202ENST00000374826 SYT15Q9BQS2 421 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 CRACR2AQ9BSW2 395 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 HDHD5Q9BXW7 423 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 ZNF700Q9H0M5 742 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 SNX25Q9H3E2 840 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 DPEP3Q9H4B8 488 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 POMKQ9H5K3 350 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 APOBEC3GQ9HC16 384 aaKnown RBP4.53□□□□□ -1.68
PMS1-202ENST00000374826 SEPSECSQ9HD40 501 aaKnown RBP4.53□□□□□ -1.68
PMS1-202ENST00000374826 PRDM8Q9NQV8 689 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 SAMSN1Q9NSI8 373 aaKnown RBP4.53□□□□□ -1.68
PMS1-202ENST00000374826 TMLHEQ9NVH6 421 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 ANO10Q9NW15 660 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 HIF1ANQ9NWT6 349 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 HCFC1R1Q9NWW0 138 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 GDAP2Q9NXN4 497 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 PLK2Q9NYY3 685 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 GCNT4Q9P109 453 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 DAPP1Q9UN19 280 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 C19orf53Q9UNZ5 99 aaPredicted RBP4.53□□□□□ -1.68
PMS1-202ENST00000374826 NFE2L3Q9Y4A8 694 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 YIPF1Q9Y548 306 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 A0A0C4DFX4 3053 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 SDK1Q7Z5N4 2213 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 TRBV5-7A0A0A0MS05 114 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 TCRBV7S3A2A0A539 114 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 MYBPHLA2RUH7 354 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 A8MXQ7 604 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 CLDN5O00501 218 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 PES1O00541 588 aaKnown RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 N4BP1O75113 896 aaKnown RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 FGFR1OPO95684 399 aaKnown RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 GNA14O95837 355 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 AFPP02771 609 aaKnown RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 CYP1A2P05177 515 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 P4HA1P13674 534 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 HOXB8P17481 243 aaPredicted RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 HOXB9P17482 250 aaPredicted RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 ATF6P18850 670 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 WARSP23381 471 aaKnown RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 PAX3P23760 479 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 PRPH2P23942 346 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 GNL1P36915 607 aaPredicted RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 SERPINF1P36955 418 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 HTR3AP46098 478 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 LHX1P48742 406 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 NDST1P52848 882 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 MYL5Q02045 173 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 ENPEPQ07075 957 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 TWF1Q12792 350 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 GPR17Q13304 367 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 PLD1Q13393 1074 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 GPR18Q14330 331 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 SGSM1Q2NKQ1 1148 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 ZSCAN23Q3MJ62 389 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 GALNTL6Q49A17 601 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 MDH1BQ5I0G3 518 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 SDHAF4Q5VUM1 108 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 TPGS2Q68CL5 300 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 LIN54Q6MZP7 749 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 CES5AQ6NT32 575 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 GET4Q7L5D6 327 aaPredicted RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 ACOT1Q86TX2 421 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 CCDC117Q8IWD4 279 aaPredicted RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 FAM114A1Q8IWE2 563 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 FAM217AQ8IXS0 508 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 IQCF1Q8N6M8 205 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 ZNF461Q8TAF7 563 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 GABPB2Q8TAK5 448 aaPredicted RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 ING5Q8WYH8 240 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 DNASE2BQ8WZ79 361 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 TAF4BQ92750 862 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 C3orf49Q96BT1 292 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 ZNF707Q96C28 371 aaPredicted RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 RPGRIP1Q96KN7 1286 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 LMLNQ96KR4 655 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 TWNKQ96RR1 684 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 PKMYT1Q99640 499 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 WDR77Q9BQA1 342 aaPredicted RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 FUCA2Q9BTY2 467 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 CRB3Q9BUF7 120 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 B3GNT4Q9C0J1 378 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 INTS2Q9H0H0 1204 aaKnown RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 S1PR5Q9H228 398 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 PABPC3Q9H361 631 aaKnown RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 PLEKHA4Q9H4M7 779 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 THAP9Q9H5L6 903 aa4.52□□□□□ -1.69
PMS1-202ENST00000374826 ACTR5Q9H9F9 607 aaPredicted RBP4.52□□□□□ -1.69
PMS1-202ENST00000374826 FAM49BQ9NUQ9 324 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms