RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 GALNT5Q7Z7M9 940 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 SFRP1Q8N474 314 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 TMEM199Q8N511 208 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 CPSF7Q8N684 471 aaKnown RBP10.6□□□□□ -0.71
CXCL12-203ENST00000374429 ADAMTS19Q8TE59 1207 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 JPH3Q8WXH2 748 aaPredicted RBP10.6□□□□□ -0.71
CXCL12-203ENST00000374429 FAM162AQ96A26 154 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 SH3KBP1Q96B97 665 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 CCT7Q99832 543 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 STN1Q9H668 368 aaKnown RBP10.6□□□□□ -0.71
CXCL12-203ENST00000374429 MAP10Q9P2G4 905 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 LZTS1Q9Y250 596 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 CFAP54Q96N23 3096 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 FRYLO94915 3013 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 DHRS12A0PJE2 317 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 PLOD2O00469 737 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 MMP20O60882 483 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 CLPTM1O96005 669 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 PABPC1P11940 636 aaKnown RBP10.59□□□□□ -0.71
CXCL12-203ENST00000374429 UQCRBP14927 111 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 HMGCLP35914 325 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 PTGER3P43115 390 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 OR4D2P58180 307 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 IRF8Q02556 426 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 SPIDRQ14159 915 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 NEDD8Q15843 81 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 PUS10Q3MIT2 529 aaKnown RBP10.59□□□□□ -0.71
CXCL12-203ENST00000374429 KCTD21Q4G0X4 260 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 MPPE1Q53F39 396 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 FOXB2Q5VYV0 432 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 RAET1GQ6H3X3 334 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 OR52E8Q6IFG1 317 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 PLD3Q8IV08 490 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 FLCNQ8NFG4 579 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 PIH1D2Q8WWB5 315 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 FBXL20Q96IG2 436 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 IL17FQ96PD4 163 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 OR52E6Q96RD3 313 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 ZBTB18Q99592 522 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 RIC8BQ9NVN3 520 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 ELOVL2Q9NXB9 296 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 PCTPQ9UKL6 214 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 TMED5Q9Y3A6 229 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 COL6A3P12111 3177 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 H3BNX3 289 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 RSL1D1O76021 490 aaKnown RBP10.59□□□□□ -0.71
CXCL12-203ENST00000374429 PAPSS2O95340 614 aaPredicted RBP10.59□□□□□ -0.71
CXCL12-203ENST00000374429 ZDHHC11BP0C7U3 371 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 PSMA4P25789 261 aaKnown RBP10.59□□□□□ -0.71
CXCL12-203ENST00000374429 PDHA2P29803 388 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 SPAM1P38567 509 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 SLC6A11P48066 632 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 MAPKAPK3Q16644 382 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 C2orf27AQ580R0 203 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 XKR6Q5GH73 641 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 SAMD4BQ5PRF9 694 aaKnown RBP10.59□□□□□ -0.71
CXCL12-203ENST00000374429 GPRC6AQ5T6X5 926 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 KBTBD6Q86V97 674 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 TPD52L3Q96J77 140 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 HAUS8Q9BT25 410 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 FAM192AQ9GZU8 254 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 IL21Q9HBE4 155 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 SPASTQ9UBP0 616 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 BCAP29Q9UHQ4 241 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 UTS2RQ9UKP6 389 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 B4GAT1O43505 415 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 STK16O75716 305 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 ABLIM3O94929 683 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 IGHA2P01877 340 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 ELFN1P0C7U0 828 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 DGKAP23743 735 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 DNAJB1P25685 340 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 CCR7P32248 378 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 HTR7P34969 479 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 PIGFQ07326 219 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 LRRC74AQ0VAA2 488 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 INAQ16352 499 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 ARTNQ5T4W7 220 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 C22orf39Q6P5X5 142 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 CYP20A1Q6UW02 462 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 SMG7Q92540 1137 aaKnown RBP10.59□□□□□ -0.71
CXCL12-203ENST00000374429 OTUB1Q96FW1 271 aaPredicted RBP10.59□□□□□ -0.71
CXCL12-203ENST00000374429 FAR2Q96K12 515 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 SH3GL1Q99961 368 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 TMEM175Q9BSA9 504 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 TRIM54Q9BYV2 358 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 OR2AG1Q9H205 316 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 C1orf21Q9H246 121 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 TFB2MQ9H5Q4 396 aaKnown RBP10.59□□□□□ -0.71
CXCL12-203ENST00000374429 GID8Q9NWU2 228 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 CMTM6Q9NX76 183 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 PDP2Q9P2J9 529 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 GNPTGQ9UJJ9 305 aa10.59□□□□□ -0.71
CXCL12-203ENST00000374429 ARIH1Q9Y4X5 557 aaPredicted RBP10.59□□□□□ -0.71
CXCL12-203ENST00000374429 ESRRBO95718 433 aa10.58□□□□□ -0.72
CXCL12-203ENST00000374429 TACR1P25103 407 aa10.58□□□□□ -0.72
CXCL12-203ENST00000374429 IL12AP29459 219 aa10.58□□□□□ -0.72
CXCL12-203ENST00000374429 ALDH9A1P49189 494 aa10.58□□□□□ -0.72
CXCL12-203ENST00000374429 GSK3BP49841 420 aa10.58□□□□□ -0.72
CXCL12-203ENST00000374429 CCR3P51677 355 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms