RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 PHF21BQ96EK2 531 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 DCUN1D1Q96GG9 259 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 TOE1Q96GM8 510 aaKnown RBP14.01□□□□□ -0.17
HMGA1-203ENST00000374116 TCF12Q99081 682 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 AARSD1Q9BTE6 412 aaKnown RBP14.01□□□□□ -0.17
HMGA1-203ENST00000374116 CPEB1Q9BZB8 566 aaKnown RBP14.01□□□□□ -0.17
HMGA1-203ENST00000374116 GSTO2Q9H4Y5 243 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 EFCAB1Q9HAE3 211 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 DYRK4Q9NR20 520 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 USP36Q9P275 1121 aaKnown RBP14.01□□□□□ -0.17
HMGA1-203ENST00000374116 PSMD13Q9UNM6 376 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 COPG1Q9Y678 874 aaKnown RBP14.01□□□□□ -0.17
HMGA1-203ENST00000374116 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 IGHV1OR15-9A0A0B4J2B8 117 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 SLC4A1P02730 911 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 CTPS1P17812 591 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 ITGB7P26010 798 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 SERPINA4P29622 427 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 AP1S1P61966 158 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 MYBPC1Q00872 1141 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 ZNF678Q5SXM1 525 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 PIP5KL1Q5T9C9 394 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 AFTPHQ6ULP2 937 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 ERN2Q76MJ5 926 aaKnown RBP14.01□□□□□ -0.17
HMGA1-203ENST00000374116 PIM3Q86V86 326 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 SPNS2Q8IVW8 549 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 TMEFF1Q8IYR6 380 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 RHEBL1Q8TAI7 183 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 SLC26A7Q8TE54 656 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 SNRNP27Q8WVK2 155 aaKnown RBP14.01□□□□□ -0.17
HMGA1-203ENST00000374116 RMDN1Q96DB5 314 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 GPR174Q9BXC1 333 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 GRIP2Q9C0E4 1043 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 FBRSQ9HAH7 460 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 UBAP1Q9NZ09 502 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 SPATA7Q9P0W8 599 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 RSL24D1Q9UHA3 163 aaKnown RBP14.01□□□□□ -0.17
HMGA1-203ENST00000374116 HCN4Q9Y3Q4 1203 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 TMEM247A6NEH6 219 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 C2orf81A6NN90 581 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 ALPIP09923 528 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 ADRB3P13945 408 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 TIMP2P16035 220 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 ZNF23P17027 643 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 ZNF37AP17032 561 aaPredicted RBP14□□□□□ -0.17
HMGA1-203ENST00000374116 HOXD12P35452 270 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 ALDH3B2P48448 385 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 KCNC1P48547 511 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 TAS2R38P59533 333 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 HERVK_113P63132 956 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 USP39Q53GS9 565 aaKnown RBP14□□□□□ -0.17
HMGA1-203ENST00000374116 BNC2Q6ZN30 1099 aaPredicted RBP14□□□□□ -0.17
HMGA1-203ENST00000374116 ARMCX6Q7L4S7 300 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 GLT6D1Q7Z4J2 308 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 RAB44Q7Z6P3 723 aaPredicted RBP14□□□□□ -0.17
HMGA1-203ENST00000374116 WDR5BQ86VZ2 330 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 SLC15A3Q8IY34 581 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 PGAM4Q8N0Y7 254 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 PQLC1Q8N2U9 271 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 KLK6Q92876 244 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 PTERQ96BW5 349 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 CCDC124Q96CT7 223 aaKnown RBP14□□□□□ -0.17
HMGA1-203ENST00000374116 RCN3Q96D15 328 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 CCT7Q99832 543 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 HAUS8Q9BT25 410 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 ERVK-6Q9BXR3 956 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 TFB2MQ9H5Q4 396 aaKnown RBP14□□□□□ -0.17
HMGA1-203ENST00000374116 C6orf106Q9H6K1 298 aaPredicted RBP14□□□□□ -0.17
HMGA1-203ENST00000374116 SYTL2Q9HCH5 934 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 BCAP29Q9UHQ4 241 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 NCKAP1Q9Y2A7 1128 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 TRAF6Q9Y4K3 522 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 WDR87Q6ZQQ6 2873 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 CACNA1HO95180 2353 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 THADAQ6YHU6 1953 aa14□□□□□ -0.17
HMGA1-203ENST00000374116 LAMA1P25391 3075 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 ZNF701M0R085 212 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 TXNDC9O14530 226 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 MAGEB3O15480 346 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 SPINT1O43278 529 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 SUPT7LO94864 414 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 FAM58BPP0C7Q3 252 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 MAT2AP31153 395 aaKnown RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 HOXA6P31267 233 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 PLA2G5P39877 138 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 ADPRHP54922 357 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 NUP107P57740 925 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 PDAP1Q13442 181 aaKnown RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 ART3Q13508 389 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 SQLEQ14534 574 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 MAPRE2Q15555 327 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 UNC50Q53HI1 259 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 TCHHL1Q5QJ38 904 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 TTC30BQ8N4P2 665 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 LPCAT1Q8NF37 534 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 ADCY4Q8NFM4 1077 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 OR4K2Q8NGD2 314 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 HSPBAP1Q96EW2 488 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 PPP1R16AQ96I34 528 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 LRIG1Q96JA1 1093 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms