RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 HIST1H2ADP20671 130 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 KCNK10P57789 538 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 FCHO2Q0JRZ9 810 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 AP5B1Q2VPB7 878 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 SAMD4BQ5PRF9 694 aaKnown RBP19.15■□□□□ 0.66
HDAC1-201ENST00000373548 RNF165Q6ZSG1 346 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 LRRC70Q7Z2Q7 622 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 TCAIMQ8N3R3 496 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 HIST1H2AHQ96KK5 128 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 HIST1H2AJQ99878 128 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 H2AFJQ9BTM1 129 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 FARSBQ9NSD9 589 aaKnown RBP19.15■□□□□ 0.66
HDAC1-201ENST00000373548 CDH7Q9ULB5 785 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 TBC1D3BA6NDS4 549 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 LINC01565O15544 149 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 WDR47O94967 919 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 SOD1P00441 154 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 CYP2A7P20853 494 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 IL12AP29459 219 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 SLC6A12P48065 614 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 PRLHRP49683 370 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 TMEM115Q12893 351 aaPredicted RBP19.15■□□□□ 0.66
HDAC1-201ENST00000373548 SYCE2Q6PIF2 218 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 CYP2U1Q7Z449 544 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 CPA6Q8N4T0 437 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 PROKR1Q8TCW9 393 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 VPS33AQ96AX1 596 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 ZNF184Q99676 751 aaPredicted RBP19.15■□□□□ 0.66
HDAC1-201ENST00000373548 HOPXQ9BPY8 73 aaPredicted RBP19.15■□□□□ 0.66
HDAC1-201ENST00000373548 PLA2G2FQ9BZM2 168 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 PCDHAC1Q9H158 963 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 ZDHHC4Q9NPG8 344 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 PSMD13Q9UNM6 376 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 CEP290O15078 2479 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 MANBAO00462 879 aa19.14■□□□□ 0.65
HDAC1-201ENST00000373548 ADRB3P13945 408 aa19.14■□□□□ 0.65
HDAC1-201ENST00000373548 HNMTP50135 292 aa19.14■□□□□ 0.65
HDAC1-201ENST00000373548 POLR2JP52435 117 aaKnown RBP19.14■□□□□ 0.65
HDAC1-201ENST00000373548 ELP6Q0PNE2 266 aa19.14■□□□□ 0.65
HDAC1-201ENST00000373548 RUNX3Q13761 415 aa19.14■□□□□ 0.65
HDAC1-201ENST00000373548 GRM2Q14416 872 aa19.14■□□□□ 0.65
HDAC1-201ENST00000373548 RFTN2Q52LD8 501 aaPredicted RBP19.14■□□□□ 0.65
HDAC1-201ENST00000373548 MINDY1Q8N5J2 469 aa19.14■□□□□ 0.65
HDAC1-201ENST00000373548 TMEM45AQ9NWC5 275 aa19.14■□□□□ 0.65
HDAC1-201ENST00000373548 HCN2Q9UL51 889 aa19.14■□□□□ 0.65
HDAC1-201ENST00000373548 CNOT6Q9ULM6 557 aaKnown RBP19.14■□□□□ 0.65
HDAC1-201ENST00000373548 FAM234BA2RU67 622 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 ATG13O75143 517 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 RECQL5O94762 991 aaPredicted RBP19.13■□□□□ 0.65
HDAC1-201ENST00000373548 CLDN9O95484 217 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 G6PDP11413 515 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 GJA4P35212 333 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 IL12RB1P42701 662 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 AP1S2P56377 157 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 CAPRIN1Q14444 709 aaKnown RBP19.13■□□□□ 0.65
HDAC1-201ENST00000373548 PTCHD3Q3KNS1 767 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 IL23RQ5VWK5 629 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 ZFP1Q6P2D0 407 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 IZUMO2Q6UXV1 221 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 MCOLN3Q8TDD5 553 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 LRRC58Q96CX6 371 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 CHFRQ96EP1 664 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 PPP3R2Q96LZ3 170 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 SLC29A3Q9BZD2 475 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 ACTL8Q9H568 366 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 GMPR2Q9P2T1 348 aaKnown RBP19.13■□□□□ 0.65
HDAC1-201ENST00000373548 ABCD2Q9UBJ2 740 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 POLR3HQ9Y535 204 aaPredicted RBP19.13■□□□□ 0.65
HDAC1-201ENST00000373548 PABPN1LA6NDY0 278 aaKnown RBP19.13■□□□□ 0.65
HDAC1-201ENST00000373548 NME4O00746 187 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 ULK1O75385 1050 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 EEDO75530 441 aaKnown RBP19.13■□□□□ 0.65
HDAC1-201ENST00000373548 GSTM1P09488 218 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 YBX1P67809 324 aaKnown RBP19.13■□□□□ 0.65
HDAC1-201ENST00000373548 GSTM4Q03013 218 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 C6orf10Q5SRN2 563 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 LPCAT4Q643R3 524 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 PRMT9Q6P2P2 845 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 NEK5Q6P3R8 708 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 CYP20A1Q6UW02 462 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 TRIM46Q7Z4K8 759 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 PQLC1Q8N2U9 271 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 LILRA3Q8N6C8 439 aaPredicted RBP19.13■□□□□ 0.65
HDAC1-201ENST00000373548 USP7Q93009 1102 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 PYCR2Q96C36 320 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 PPP1R16AQ96I34 528 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 ACTR8Q9H981 624 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 GID8Q9NWU2 228 aa19.13■□□□□ 0.65
HDAC1-201ENST00000373548 ZNF490Q9ULM2 529 aaPredicted RBP19.13■□□□□ 0.65
HDAC1-201ENST00000373548 K7ESM1 405 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 SLC28A1O00337 649 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 CASQ2O14958 399 aaPredicted RBP19.12■□□□□ 0.65
HDAC1-201ENST00000373548 ANKRD28O15084 1053 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 RGS14O43566 566 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 C6P13671 934 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 PREPP48147 710 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 TRAP1Q12931 704 aaKnown RBP19.12■□□□□ 0.65
HDAC1-201ENST00000373548 TLR1Q15399 786 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 SYTL3Q4VX76 610 aa19.12■□□□□ 0.65
HDAC1-201ENST00000373548 SGO1Q5FBB7 561 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms