RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 CCR2P41597 374 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 ALDH3B2P48448 385 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 CRY1Q16526 586 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 FXNQ16595 210 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 TMTC4Q5T4D3 741 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 SERPINA13PQ6UXR4 307 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 DPY19L3Q6ZPD9 716 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 HTR3DQ70Z44 454 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 RIMKLAQ8IXN7 391 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 PACRGLQ8N7B6 248 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 FBXO30Q8TB52 745 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 RC3H2Q9HBD1 1191 aaKnown RBP23.32■■□□□ 1.32
CDK9-201ENST00000373264 DLGAP4Q9Y2H0 992 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 PCDHB3Q9Y5E6 796 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 FADS3Q9Y5Q0 445 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 LEFTY2O00292 366 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 ARNTLO00327 626 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 SOCS5O75159 536 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 PHC1P78364 1004 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 LAPTM5Q13571 262 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 SULT1C3Q6IMI6 304 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 ANKRD33Q7Z3H0 272 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 DDX53Q86TM3 631 aaKnown RBP23.31■■□□□ 1.32
CDK9-201ENST00000373264 FIBINQ8TAL6 211 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 THUMPD3Q9BV44 507 aaKnown RBP23.31■■□□□ 1.32
CDK9-201ENST00000373264 ARL15Q9NXU5 204 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 PDE10AQ9Y233 779 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 KANSL1LA0AUZ9 987 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 H0Y858 1186 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 UPK1AO00322 258 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 CLOCKO15516 846 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 RPS9P46781 194 aaKnown RBP23.31■■□□□ 1.32
CDK9-201ENST00000373264 CTBSQ01459 385 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 ZNF648Q5T619 568 aaPredicted RBP23.31■■□□□ 1.32
CDK9-201ENST00000373264 GRAMD4Q6IC98 578 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 CNKSR3Q6P9H4 555 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 ANKRD46Q86W74 232 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 TMEM25Q86YD3 366 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 TBC1D21Q8IYX1 336 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 HS3ST5Q8IZT8 346 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 GOLM1Q8NBJ4 401 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 OR10Q1Q8NGQ4 319 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 BPIFB1Q8TDL5 484 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 ULK4Q96C45 1275 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 PPP3R2Q96LZ3 170 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 CORO1BQ9BR76 489 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 ACPTQ9BZG2 426 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.31■■□□□ 1.32
CDK9-201ENST00000373264 CIDEBQ9UHD4 219 aa23.31■■□□□ 1.32
CDK9-201ENST00000373264 DENND4CQ5VZ89 1909 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 UPK3BL1B0FP48 263 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 UPK3BL2E5RIL1 263 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 STK16O75716 305 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 GSNP06396 782 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 EPB42P16452 691 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 RPIAP49247 311 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 MNX1P50219 401 aaPredicted RBP23.3■■□□□ 1.32
CDK9-201ENST00000373264 IMPG1Q17R60 797 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 MPPE1Q53F39 396 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 HAUS8Q9BT25 410 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 LRTM1Q9HBL6 345 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 RGS14O43566 566 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 GNRH1P01148 92 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 PDYNP01213 254 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 AASDHQ4L235 1098 aaPredicted RBP23.3■■□□□ 1.32
CDK9-201ENST00000373264 Q6ZVU0 165 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 SCRN2Q96FV2 425 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 DPY30Q9C005 99 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 MUC13Q9H3R2 512 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 SMPD3Q9NY59 655 aaPredicted RBP23.3■■□□□ 1.32
CDK9-201ENST00000373264 SLC8A2Q9UPR5 921 aa23.3■■□□□ 1.32
CDK9-201ENST00000373264 B4GAT1O43505 415 aa23.29■■□□□ 1.32
CDK9-201ENST00000373264 KCNH1O95259 989 aa23.29■■□□□ 1.32
CDK9-201ENST00000373264 C1SP09871 688 aa23.29■■□□□ 1.32
CDK9-201ENST00000373264 ACRP10323 421 aa23.29■■□□□ 1.32
CDK9-201ENST00000373264 GGT1P19440 569 aa23.29■■□□□ 1.32
CDK9-201ENST00000373264 TACR1P25103 407 aa23.29■■□□□ 1.32
CDK9-201ENST00000373264 GNPDA1P46926 289 aa23.29■■□□□ 1.32
CDK9-201ENST00000373264 MAPKAPK3Q16644 382 aa23.29■■□□□ 1.32
CDK9-201ENST00000373264 SPATS1Q496A3 300 aa23.29■■□□□ 1.32
CDK9-201ENST00000373264 C22orf39Q6P5X5 142 aa23.29■■□□□ 1.32
CDK9-201ENST00000373264 ITIH5Q86UX2 942 aa23.29■■□□□ 1.32
CDK9-201ENST00000373264 BEND7Q8N7W2 519 aaPredicted RBP23.29■■□□□ 1.32
CDK9-201ENST00000373264 ITFG1Q8TB96 612 aa23.29■■□□□ 1.32
CDK9-201ENST00000373264 SCAMP4Q969E2 229 aa23.29■■□□□ 1.32
CDK9-201ENST00000373264 LMLNQ96KR4 655 aa23.29■■□□□ 1.32
CDK9-201ENST00000373264 SUV39H2Q9H5I1 410 aa23.29■■□□□ 1.32
CDK9-201ENST00000373264 EIF3LQ9Y262 564 aaKnown RBP23.29■■□□□ 1.32
CDK9-201ENST00000373264 TMX2-CTNND1H3BSU7 103 aa23.28■■□□□ 1.32
CDK9-201ENST00000373264 PRAMEF4O60810 478 aa23.28■■□□□ 1.32
CDK9-201ENST00000373264 PGRP06401 933 aa23.28■■□□□ 1.32
CDK9-201ENST00000373264 BCKDHAP12694 445 aa23.28■■□□□ 1.32
CDK9-201ENST00000373264 BOP1Q14137 746 aaKnown RBP23.28■■□□□ 1.32
CDK9-201ENST00000373264 PRAMEF9Q5VWM5 478 aa23.28■■□□□ 1.32
CDK9-201ENST00000373264 TPRG1Q6ZUI0 275 aa23.28■■□□□ 1.32
CDK9-201ENST00000373264 PROSER1Q86XN7 944 aa23.28■■□□□ 1.32
CDK9-201ENST00000373264 GFM2Q969S9 779 aaKnown RBP23.28■■□□□ 1.32
CDK9-201ENST00000373264 COPS8Q99627 209 aa23.28■■□□□ 1.32
CDK9-201ENST00000373264 ACTR8Q9H981 624 aa23.28■■□□□ 1.32
CDK9-201ENST00000373264 HPS4Q9NQG7 708 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms