RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 TRAF3Q13114 568 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 RSBN1Q5VWQ0 802 aaPredicted RBP14.46□□□□□ -0.09
NDC1-201ENST00000371429 ZCCHC7Q8N3Z6 543 aaKnown RBP14.46□□□□□ -0.09
NDC1-201ENST00000371429 CAMKVQ8NCB2 501 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 ZBED3Q96IU2 234 aaPredicted RBP14.46□□□□□ -0.09
NDC1-201ENST00000371429 ARL8BQ9NVJ2 186 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 CYP8B1Q9UNU6 501 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 MAN2B1O00754 1011 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 GRID2O43424 1007 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 PAK4O96013 591 aaPredicted RBP14.46□□□□□ -0.09
NDC1-201ENST00000371429 GIMD1P0DJR0 217 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 GKP32189 559 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 SPANXN2Q5MJ10 180 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 ZNF57Q68EA5 555 aaPredicted RBP14.46□□□□□ -0.09
NDC1-201ENST00000371429 ERN2Q76MJ5 926 aaKnown RBP14.46□□□□□ -0.09
NDC1-201ENST00000371429 OR4E2Q8NGC2 313 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 TAC3Q9UHF0 121 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 MYH2Q9UKX2 1941 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 TCRBV7S3A2A0A539 114 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 MAGEB17A8MXT2 336 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 PCDH7O60245 1069 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 LEFTY1O75610 366 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 WFS1O76024 890 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 KAT7O95251 611 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 FAM182AQ5T1J6 154 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 ABHD13Q7L211 337 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 CLNKQ7Z7G1 428 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 RNASE11Q8TAA1 199 aaKnown RBP14.46□□□□□ -0.09
NDC1-201ENST00000371429 GPR151Q8TDV0 419 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 SPATA6Q9NWH7 488 aaPredicted RBP14.46□□□□□ -0.09
NDC1-201ENST00000371429 SLC2A6Q9UGQ3 507 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 GNEQ9Y223 722 aaKnown RBP14.46□□□□□ -0.09
NDC1-201ENST00000371429 C2orf78A6NCI8 922 aa14.46□□□□□ -0.1
NDC1-201ENST00000371429 MEIS3P2A8K0S8 358 aa14.46□□□□□ -0.1
NDC1-201ENST00000371429 KLK3P07288 261 aaPredicted RBP14.46□□□□□ -0.1
NDC1-201ENST00000371429 FAM91A1Q658Y4 838 aa14.46□□□□□ -0.1
NDC1-201ENST00000371429 ABRAXAS1Q6UWZ7 409 aa14.46□□□□□ -0.1
NDC1-201ENST00000371429 RPTNQ6XPR3 784 aa14.46□□□□□ -0.1
NDC1-201ENST00000371429 PTCHD4Q6ZW05 846 aa14.46□□□□□ -0.1
NDC1-201ENST00000371429 RASSF5Q8WWW0 418 aa14.46□□□□□ -0.1
NDC1-201ENST00000371429 ZNF641Q96N77 438 aaPredicted RBP14.46□□□□□ -0.1
NDC1-201ENST00000371429 NUAK2Q9H093 628 aa14.46□□□□□ -0.1
NDC1-201ENST00000371429 URB1O60287 2271 aaKnown RBP14.45□□□□□ -0.1
NDC1-201ENST00000371429 TCRBV21S2A2A0A5A6 115 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 TGFB1P01137 390 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 FOSL2P15408 326 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 LMAN2Q12907 356 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 GPRC6AQ5T6X5 926 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 MLIPQ5VWP3 458 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 YTHDF3Q7Z739 585 aaKnown RBP14.45□□□□□ -0.1
NDC1-201ENST00000371429 PIK3C3Q8NEB9 887 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 NCSTNQ92542 709 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 SLC38A4Q969I6 547 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 SLC35G5Q96KT7 338 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 FEM1AQ9BSK4 669 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 NDC1Q9BTX1 674 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.45□□□□□ -0.1
NDC1-201ENST00000371429 REXO4Q9GZR2 422 aaKnown RBP14.45□□□□□ -0.1
NDC1-201ENST00000371429 SPRTNQ9H040 489 aaPredicted RBP14.45□□□□□ -0.1
NDC1-201ENST00000371429 SLC17A6Q9P2U8 582 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 ERI3O43414 337 aaKnown RBP14.45□□□□□ -0.1
NDC1-201ENST00000371429 BEST1O76090 585 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 CTSAP10619 480 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 CD247P20963 164 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 FECHP22830 423 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 ACTR3P61158 418 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 FAM174BQ3ZCQ3 159 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 CNTD1Q8N815 330 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 GLB1L3Q8NCI6 653 aaPredicted RBP14.45□□□□□ -0.1
NDC1-201ENST00000371429 GSTCDQ8NEC7 633 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 TUBGCP5Q96RT8 1024 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 HERC2P3Q9BVR0 1158 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 CRISPLD1Q9H336 500 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 CDH7Q9ULB5 785 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 KCTD3Q9Y597 815 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 SDK1Q7Z5N4 2213 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 TGM5O43548 720 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 NR2F6P10588 404 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 MPIP34949 423 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 NFKB2Q00653 900 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 LIPEQ05469 1076 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 RAPSNQ13702 412 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 PIK3R6Q5UE93 754 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 ZNF783Q6ZMS7 281 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 SLC9B2Q86UD5 537 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 UXS1Q8NBZ7 420 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 KCNN2Q9H2S1 579 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 RAPGEFL1Q9UHV5 662 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 SNX7Q9UNH6 387 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 PHF24Q9UPV7 400 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 PNMA8CA0A1B0GUJ8 204 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 LIN7AO14910 233 aaPredicted RBP14.45□□□□□ -0.1
NDC1-201ENST00000371429 LAMTOR5O43504 91 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 OAZ2O95190 189 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 CYP4B1P13584 511 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 IL7RP16871 459 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 GRIA2P42262 883 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 RAB33AQ14088 237 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 DGUOKQ16854 277 aa14.45□□□□□ -0.1
NDC1-201ENST00000371429 ZNF805Q5CZA5 627 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms