RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 HAPLN3Q96S86 360 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 DUSP26Q9BV47 211 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 ITPAQ9BY32 194 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 DUOX1Q9NRD9 1551 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 SNED1Q8TER0 1413 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 A0A1B0GVM2 712 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 C1QTNF3-AMACRE9PGA6 284 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 WWP2O00308 870 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 PER2O15055 1255 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 IL1BP01584 269 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 VARSP26640 1264 aaKnown RBP16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 DGKQP52824 942 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 AGMOQ6ZNB7 445 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 SLC43A3Q8NBI5 491 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 RNASE11Q8TAA1 199 aaKnown RBP16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 UFD1Q92890 307 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 EXOSC8Q96B26 276 aaKnown RBP16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 MIPEPQ99797 713 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 TVP23BQ9NYZ1 205 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 RPL36Q9Y3U8 105 aaKnown RBP16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 MON2Q7Z3U7 1717 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 ABHD14A-ACY1A0A1B0GW23 586 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 IL7RP16871 459 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 SLC15A1P46059 708 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 HCAR3P49019 387 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 RAPSNQ13702 412 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 SPRED3Q2MJR0 410 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 OR2T5Q6IEZ7 315 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 SLC2A7Q6PXP3 512 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 OR2T29Q8NH02 315 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 CORO1BQ9BR76 489 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 MYH10P35580 1976 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 IQCMA0A1B0GVH7 501 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 FFAR2O15552 330 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 PSKH1P11801 424 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 TUBA1BP68363 451 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 MYBPC1Q00872 1141 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 HMGCS1Q01581 520 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 C6orf183Q5T699 404 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 SERPINA13PQ6UXR4 307 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 TUBA1AQ71U36 451 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 CAND1Q86VP6 1230 aaKnown RBP16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 GJD3Q8N144 294 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 TRNT1Q96Q11 434 aaKnown RBP16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 ADAM7Q9H2U9 754 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 ZNF282Q9UDV7 671 aaPredicted RBP16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 TREHO43280 583 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 INMTO95050 263 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 CLIC3O95833 236 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 ZNF182P17025 639 aaPredicted RBP16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 GNAZP19086 355 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 PPP2R2BQ00005 443 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 CBX2Q14781 532 aaPredicted RBP16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 RABL3Q5HYI8 236 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 RPTNQ6XPR3 784 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 PQLC3Q8N755 202 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 CXorf40BQ96DE9 158 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 TOR3AQ9H497 397 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 SLIT2O94813 1529 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 KLHL33A6NCF5 533 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 PCP4L1A6NKN8 68 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 AP1S1P61966 158 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 PCDH1Q08174 1060 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 TCEA2Q15560 299 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 ZUFSPQ96AP4 578 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 FERD3LQ96RJ6 166 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 PCDHGA11Q9Y5H2 935 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 ZFP37Q9Y6Q3 630 aaPredicted RBP16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 IST1P53990 364 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 AP3S2P59780 193 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 DSC3Q14574 896 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 KLHL22Q53GT1 634 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 RBM20Q5T481 1227 aaKnown RBP16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 CDHR3Q6ZTQ4 885 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 CLEC20AQ6ZU45 233 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 PJA1Q8NG27 643 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 TTPALQ9BTX7 342 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 BCO2Q9BYV7 579 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 RPF2Q9H7B2 306 aaKnown RBP16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 GALPQ9UBC7 116 aa16.84■□□□□ 0.29
PTP4A1-201ENST00000370651 FAM208AQ9UK61 1670 aaKnown RBP16.83■□□□□ 0.29
PTP4A1-201ENST00000370651 NT5C1B-RDH14C9J2C7 533 aa16.83■□□□□ 0.29
PTP4A1-201ENST00000370651 E7ESA3 106 aa16.83■□□□□ 0.29
PTP4A1-201ENST00000370651 IRAK2O43187 625 aa16.83■□□□□ 0.29
PTP4A1-201ENST00000370651 C22orf31O95567 290 aa16.83■□□□□ 0.29
PTP4A1-201ENST00000370651 C8GP07360 202 aa16.83■□□□□ 0.29
PTP4A1-201ENST00000370651 LAMP2P13473 410 aa16.83■□□□□ 0.29
PTP4A1-201ENST00000370651 MAPK12P53778 367 aa16.83■□□□□ 0.29
PTP4A1-201ENST00000370651 TLR1Q15399 786 aa16.83■□□□□ 0.29
PTP4A1-201ENST00000370651 MEP1AQ16819 746 aa16.83■□□□□ 0.29
PTP4A1-201ENST00000370651 CRELD1Q96HD1 420 aa16.83■□□□□ 0.29
PTP4A1-201ENST00000370651 TMEM74Q96NL1 305 aa16.83■□□□□ 0.29
PTP4A1-201ENST00000370651 POLR3BQ9NW08 1133 aaPredicted RBP16.83■□□□□ 0.29
PTP4A1-201ENST00000370651 SOWAHBA6NEL2 793 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 NIPSNAP2O75323 286 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 ITIH1P19827 911 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 FBXO43Q4G163 708 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 PLD6Q8N2A8 252 aaKnown RBP16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 NAT16Q8N8M0 369 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 PIGXQ8TBF5 258 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms