RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 MIPEPQ99797 713 aa19.33■□□□□ 0.68
LMO4-202ENST00000370544 DUSP26Q9BV47 211 aa19.33■□□□□ 0.68
LMO4-202ENST00000370544 KLHL31Q9H511 634 aa19.33■□□□□ 0.68
LMO4-202ENST00000370544 ECI2O75521 394 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 IL12AP29459 219 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 MTPNP58546 118 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 ERVK-8P63133 956 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 PITRM1Q5JRX3 1037 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 NAPRTQ6XQN6 538 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 CDK15Q96Q40 435 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 WDR26Q9H7D7 661 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 TMEM138Q9NPI0 162 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 TESMINQ9Y4I5 508 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 ANGPTL1O95841 491 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 GIMD1P0DJR0 217 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.32■□□□□ 0.68
LMO4-202ENST00000370544 RANBP3LQ86VV4 465 aaPredicted RBP19.32■□□□□ 0.68
LMO4-202ENST00000370544 SMOQ99835 787 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 OSBPL7Q9BZF2 842 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 BNC1Q01954 994 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 PDGFRLQ15198 375 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 NSMCE3Q96MG7 304 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 FSHRP23945 695 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 PEX2P28328 305 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 HSD17B2P37059 387 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 SLC11A1P49279 550 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 KHKP50053 298 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 WDR4P57081 412 aaKnown RBP19.32■□□□□ 0.68
LMO4-202ENST00000370544 DPY19L1Q2PZI1 675 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 FAM91A1Q658Y4 838 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 SLC25A24Q6NUK1 477 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 DNAJB8Q8NHS0 232 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 MCFD2Q8NI22 146 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 IL12RB2Q99665 862 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 STYXL1Q9Y6J8 313 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 LRRC37A3O60309 1634 aa19.32■□□□□ 0.68
LMO4-202ENST00000370544 RIIAD1A6NNX1 92 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 IDH3BO43837 385 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 F7P08709 466 aaPredicted RBP19.31■□□□□ 0.68
LMO4-202ENST00000370544 PRKAR1AP10644 381 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 GJA1P17302 382 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 CPN2P22792 545 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 C1QTNF8P60827 252 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 KHDC1Q4VXA5 237 aaKnown RBP19.31■□□□□ 0.68
LMO4-202ENST00000370544 IFI44LQ53G44 452 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 GPR65Q8IYL9 337 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 WDR12Q9GZL7 423 aaKnown RBP19.31■□□□□ 0.68
LMO4-202ENST00000370544 SIX4Q9UIU6 781 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 IKZF2Q9UKS7 526 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 EME2A4GXA9 379 aaPredicted RBP19.31■□□□□ 0.68
LMO4-202ENST00000370544 MLLT6P55198 1093 aaPredicted RBP19.31■□□□□ 0.68
LMO4-202ENST00000370544 OR2AP1Q8NGE2 309 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 CYB5D2Q8WUJ1 264 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 COX4I2Q96KJ9 171 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 PRRG4Q9BZD6 226 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 ABLIM1O14639 778 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 MPZL2O60487 215 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 ZSCAN5AQ9BUG6 496 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 FAM92AA1XBS5 289 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 A8MT66 165 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 PCDH7O60245 1069 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 ALDH4A1P30038 563 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 BRAT1Q6PJG6 821 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 ZDHHC21Q8IVQ6 265 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 ZBED6CLQ96FA7 236 aaPredicted RBP19.31■□□□□ 0.68
LMO4-202ENST00000370544 SLC2A6Q9UGQ3 507 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 POMPQ9Y244 141 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 PRKAB1Q9Y478 270 aa19.31■□□□□ 0.68
LMO4-202ENST00000370544 ITM2AO43736 263 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 CCL5P13501 91 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 CHRNA6Q15825 494 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 LIN54Q6MZP7 749 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 COMMD9Q9P000 198 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 XRN1Q8IZH2 1706 aaKnown RBP19.3■□□□□ 0.68
LMO4-202ENST00000370544 SNAI1O95863 264 aaPredicted RBP19.3■□□□□ 0.68
LMO4-202ENST00000370544 HKDC1Q2TB90 917 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 ZNF142P52746 1687 aaPredicted RBP19.3■□□□□ 0.68
LMO4-202ENST00000370544 SAP18O00422 153 aaKnown RBP19.3■□□□□ 0.68
LMO4-202ENST00000370544 FAM131AQ6UXB0 335 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 AHSA2Q719I0 299 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 SAMD14Q8IZD0 417 aaPredicted RBP19.3■□□□□ 0.68
LMO4-202ENST00000370544 GTPBP3Q969Y2 492 aaKnown RBP19.3■□□□□ 0.68
LMO4-202ENST00000370544 GAL3ST4Q96RP7 486 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 A0A1W2PQ45 241 aaPredicted RBP19.3■□□□□ 0.68
LMO4-202ENST00000370544 A0A1W2PQY0 241 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 HAPLN1P10915 354 aaPredicted RBP19.3■□□□□ 0.68
LMO4-202ENST00000370544 GALNT2Q10471 571 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 GPR17Q13304 367 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 XKR4Q5GH76 650 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 MS4A13Q5J8X5 152 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 MMAAQ8IVH4 418 aaKnown RBP19.3■□□□□ 0.68
LMO4-202ENST00000370544 HAS3O00219 553 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 NME6O75414 186 aaPredicted RBP19.3■□□□□ 0.68
LMO4-202ENST00000370544 AVPR1BP47901 424 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 BLKP51451 505 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 NDUFA5Q16718 116 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 FAM182AQ5T1J6 154 aa19.3■□□□□ 0.68
LMO4-202ENST00000370544 CELF5Q8N6W0 485 aaKnown RBP19.3■□□□□ 0.68
LMO4-202ENST00000370544 VIPR1P32241 457 aa19.29■□□□□ 0.68
LMO4-202ENST00000370544 TIE1P35590 1138 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms