RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 H6PDO95479 791 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 CMPK1P30085 196 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 ACSL1P33121 698 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 SLC9A3P48764 834 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 FASTKD3Q14CZ7 662 aaKnown RBP12.27□□□□□ -0.44
HCFC1-202ENST00000369984 ECHDC2Q86YB7 292 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 CEP76Q8TAP6 659 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 NXPE2Q96DL1 559 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 GPR21Q99679 349 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 IDI2Q9BXS1 227 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 EBF3Q9H4W6 596 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 ALKBH4Q9NXW9 302 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 PSMD8P48556 350 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 CLCN7P51798 805 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 PUM1Q14671 1186 aaKnown RBP eCLIP12.27□□□□□ -0.452e-7■■□□□ 14.5
HCFC1-202ENST00000369984 PRAMEF19Q5SWL8 479 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 MON1AQ86VX9 555 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 FITM2Q8N6M3 262 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 C7orf26Q96N11 449 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 KCTD15Q96SI1 283 aaPredicted RBP12.27□□□□□ -0.45
HCFC1-202ENST00000369984 SLC39A3Q9BRY0 314 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 RNF38Q9H0F5 515 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 LHX5Q9H2C1 402 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 SMURF2Q9HAU4 748 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 CD2P06729 351 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 MYCLP1P12525 358 aaPredicted RBP12.27□□□□□ -0.45
HCFC1-202ENST00000369984 KELP23276 732 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 OR3A3P47888 321 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 OR3A2P47893 321 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 DCDC1P59894 354 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 IL17AQ16552 155 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 RAB12Q6IQ22 244 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 ZMIZ2Q8NF64 920 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 HAS1Q92839 578 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 PTTG2Q9NZH5 202 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 ERCC6L2Q5T890 1561 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 LOC100509620A0A075B734 347 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 AHCYP23526 432 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 DUSP4Q13115 394 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 SLC9B1Q4ZJI4 515 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 KLHL26Q53HC5 615 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 STRADAQ7RTN6 431 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 NUP54Q7Z3B4 507 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 UNC5BQ8IZJ1 945 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 SPEF2Q9C093 1822 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 UNC93B1Q9H1C4 597 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 COQ10BQ9H8M1 238 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 BRD7Q9NPI1 651 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 CCDC163A0A0D9SF12 145 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 ZNF99A8MXY4 864 aaPredicted RBP12.27□□□□□ -0.45
HCFC1-202ENST00000369984 C9JVG2 144 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 PSMD10O75832 226 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 VMACQ2NL98 169 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 FAM174BQ3ZCQ3 159 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 EIPR1Q53HC9 387 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 SLC9A9Q8IVB4 645 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 SLC30A8Q8IWU4 369 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 ZNF649Q9BS31 505 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 IFT27Q9BW83 186 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 CD84Q9UIB8 345 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 PRDM4Q9UKN5 801 aa12.27□□□□□ -0.45
HCFC1-202ENST00000369984 CEMIPQ8WUJ3 1361 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 CXCR6O00574 342 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 PPEF2O14830 753 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 ADGRE1Q14246 886 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 HEPACAMQ14CZ8 416 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 SHC3Q92529 594 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 RBM18Q96H35 190 aaKnown RBP12.26□□□□□ -0.45
HCFC1-202ENST00000369984 CHRAC1Q9NRG0 131 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 SPATA31A5Q5VU36 1347 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 SPATA31A7Q8IWB4 1347 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 MAFO75444 373 aaPredicted RBP12.26□□□□□ -0.45
HCFC1-202ENST00000369984 PRAMEF1O95521 474 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 AP2A1O95782 977 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 PAX3P23760 479 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 RBM34P42696 430 aaKnown RBP12.26□□□□□ -0.45
HCFC1-202ENST00000369984 CHAF1BQ13112 559 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 CEP68Q76N32 757 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 OR2L8Q8NGY9 312 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 OR2AJ1Q8NGZ0 328 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 FAM110BQ8TC76 370 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 B3GNT5Q9BYG0 378 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 MAGEE1Q9HCI5 957 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 PCDHGB7Q9Y5F8 929 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 PTPRJQ12913 1337 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 OR6C70A6NIJ9 312 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 H7C2Y5 167 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 SLC10A7Q0GE19 358 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 LCP2Q13094 533 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 CSPG4P5Q96PW8 444 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 DHX33Q9H6R0 707 aaKnown RBP12.26□□□□□ -0.45
HCFC1-202ENST00000369984 PTPRUQ92729 1446 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 VIPP01282 170 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 TPTEP56180 551 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 SLC13A2Q13183 592 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 MINDY4Q4G0A6 757 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 ALG1LQ6GMV1 187 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 ADGRD1Q6QNK2 874 aa12.26□□□□□ -0.45
HCFC1-202ENST00000369984 RBM23Q86U06 439 aaKnown RBP12.26□□□□□ -0.45
HCFC1-202ENST00000369984 COX18Q8N8Q8 333 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms