RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 MEAF6Q9HAF1 191 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 PNPLA3Q9NST1 481 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 AP4B1Q9Y6B7 739 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 FAM220BPB1ANY3 271 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 ERN1O75460 977 aaKnown RBP5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 PDE9AO76083 593 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 ABLIM3O94929 683 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 NTRK1P04629 796 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 ANXA4P09525 319 aaPredicted RBP5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 PRPS1L1P21108 318 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 IGFBP4P22692 258 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 GLDCP23378 1020 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 RPS3P23396 243 aaKnown RBP eCLIP5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 PEX2P28328 305 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 PSMD7P51665 324 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 CDKN2DP55273 166 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 DEFB103AP81534 67 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 NFKB2Q00653 900 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 EMX2Q04743 252 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 SPIDRQ14159 915 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 OTUD1Q5VV17 481 aaPredicted RBP5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 LHX8Q68G74 356 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 ZCCHC8Q6NZY4 707 aaKnown RBP5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 GOLGA7Q7Z5G4 137 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 ISCA2Q86U28 154 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 TRIM74Q86UV6 250 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 TRIM73Q86UV7 250 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 SATL1Q86VE3 508 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 TREML1Q86YW5 311 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 C8orf59Q8N0T1 100 aaPredicted RBP5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 TRAM1L1Q8N609 369 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 MAGEE2Q8TD90 523 aaPredicted RBP5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 BADQ92934 168 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 SLC7A6OSQ96CW6 309 aaPredicted RBP5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 SCRN2Q96FV2 425 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 CD244Q9BZW8 370 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 SMG9Q9H0W8 520 aaKnown RBP5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 OR2AG1Q9H205 316 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 TMEM165Q9HC07 324 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 ELOVL2Q9NXB9 296 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 IL17CQ9P0M4 197 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 ADGRE2Q9UHX3 823 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 FBXO10Q9UK96 956 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 TPRKBQ9Y3C4 175 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 COLEC10Q9Y6Z7 277 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 DOCK5Q9H7D0 1870 aa5.21□□□□□ -1.57
SMNDC1-202ENST00000369603 A0A1W2PP18 115 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 SOBPA7XYQ1 873 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 M0R3G1 203 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 ADAM12O43184 909 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 LRATO95237 230 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 CST1P01037 141 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 MPC1LP0DKB6 136 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC7A1P30825 629 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 MSX2P35548 267 aaPredicted RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 INPP1P49441 399 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 NR1H2P55055 460 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 IL5RAQ01344 420 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 RGS1Q08116 209 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 TRIM16LQ309B1 348 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 RFTN2Q52LD8 501 aaPredicted RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 PDCD4Q53EL6 469 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 UNC50Q53HI1 259 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 PSAPL1Q6NUJ1 521 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 ABRAXAS1Q6UWZ7 409 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 AMIGO2Q86SJ2 522 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 SPPL2CQ8IUH8 684 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 HID1Q8IV36 788 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 SVOPQ8N4V2 548 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 OR4F6Q8NGB9 312 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 OR14C36Q8NHC7 312 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 LRRC58Q96CX6 371 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 CENPNQ96H22 339 aaPredicted RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 NSUN3Q9H649 340 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 CERS4Q9HA82 394 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 IMP3Q9NV31 184 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 H2AFY2Q9P0M6 372 aaPredicted RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 OARD1Q9Y530 152 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 PIPSLA2A3N6 862 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 LRRC72A6NJI9 287 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 ZW10O43264 779 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 MAP3K13O43283 966 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 CXCL10P02778 98 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 PCCBP05166 539 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 GSTM1P09488 218 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 ATXN8OSP0DMR3 200 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 SYN1P17600 705 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 AQP4P55087 323 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 SMIM11AP58511 58 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 SEMG2Q02383 582 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 GSTM4Q03013 218 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 ATP1A4Q13733 1029 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 ADGRE1Q14246 886 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 FAM174BQ3ZCQ3 159 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 LRRC73Q5JTD7 316 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 FRG2Q64ET8 278 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 NADSYN1Q6IA69 706 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 METTL2BQ6P1Q9 378 aaKnown RBP5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 VITQ6UXI7 678 aa5.21□□□□□ -1.58
SMNDC1-202ENST00000369603 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms