RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 IPPKQ9H8X2 491 aa16.42■□□□□ 0.22
PHGDH-202ENST00000369409 POLMQ9NP87 494 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-202ENST00000369409 SORCS3Q9UPU3 1222 aa16.42■□□□□ 0.22
PHGDH-202ENST00000369409 BTRCQ9Y297 605 aa16.42■□□□□ 0.22
PHGDH-202ENST00000369409 TIMM22Q9Y584 194 aa16.42■□□□□ 0.22
PHGDH-202ENST00000369409 C17orf113A0A1B0GUU1 675 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 MGAT4DA6NG13 374 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 PIP5K1BO14986 540 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 STK16O75716 305 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 DNAJC8O75937 253 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-202ENST00000369409 ATP5HO75947 161 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 CATP04040 527 aaKnown RBP16.41■□□□□ 0.22
PHGDH-202ENST00000369409 PKNOX1P55347 436 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 ERVPABLB-1P60509 514 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 TRAF3Q13114 568 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 TBCCQ15814 346 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 LETMD1Q6P1Q0 360 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 FAM83HQ6ZRV2 1179 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-202ENST00000369409 DDIASQ8IXT1 998 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 ZNF687Q8N1G0 1237 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 CDYL2Q8N8U2 506 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 ATP6V1E2Q96A05 226 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 NSL1Q96IY1 281 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 FOPNLQ96NB1 174 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 BTBD1Q9H0C5 482 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 TM7SF3Q9NS93 570 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 KLC4Q9NSK0 619 aa16.41■□□□□ 0.22
PHGDH-202ENST00000369409 ATP6AP2A0A1C7CYW4 349 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 ATP6AP2O75787 350 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 MAPK9P45984 424 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 HNMTP50135 292 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 CCNG1P51959 295 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 PRKCQQ04759 706 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 LRRC32Q14392 662 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 UBXN2BQ14CS0 331 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 ZXDCQ2QGD7 858 aaPredicted RBP16.4■□□□□ 0.22
PHGDH-202ENST00000369409 AMZ2Q86W34 360 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 KIF2BQ8N4N8 673 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 OR4F6Q8NGB9 312 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 OR2T34Q8NGX1 318 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 CEP70Q8NHQ1 597 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 ACTRT2Q8TDY3 377 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 KLHL29Q96CT2 875 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 C3orf30Q96M34 536 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 NUSAP1Q9BXS6 441 aaKnown RBP16.4■□□□□ 0.22
PHGDH-202ENST00000369409 TUBB1Q9H4B7 451 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 LMAN1LQ9HAT1 526 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 C2orf42Q9NWW7 574 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 SLC23A2Q9UGH3 650 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 EBF1Q9UH73 591 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 CIDEBQ9UHD4 219 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 STK38LQ9Y2H1 464 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 CAPN7Q9Y6W3 813 aa16.4■□□□□ 0.22
PHGDH-202ENST00000369409 KRBA1A5PL33 1030 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 KATNA1O75449 491 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 OTCP00480 354 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 UROSP10746 265 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 ESRRAP11474 423 aaPredicted RBP16.39■□□□□ 0.22
PHGDH-202ENST00000369409 AOC1P19801 751 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 CALB2P22676 271 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 GGT5P36269 586 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 DGKEP52429 567 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 CCSMST1Q4G0I0 132 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 ANO7Q6IWH7 933 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 METTL2BQ6P1Q9 378 aaKnown RBP16.39■□□□□ 0.22
PHGDH-202ENST00000369409 LRRC70Q7Z2Q7 622 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 TRIM69Q86WT6 500 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 ADHFE1Q8IWW8 467 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 OXR1Q8N573 874 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 SLC7A6OSQ96CW6 309 aaPredicted RBP16.39■□□□□ 0.22
PHGDH-202ENST00000369409 USP36Q9P275 1121 aaKnown RBP16.39■□□□□ 0.22
PHGDH-202ENST00000369409 ZNHIT2Q9UHR6 403 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 FBXL21Q9UKT6 434 aa16.39■□□□□ 0.22
PHGDH-202ENST00000369409 LRRC72A6NJI9 287 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 GPR89AB7ZAQ6 455 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 WDR47O94967 919 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 GPR89BP0CG08 455 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 EPB42P16452 691 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 CPA2P48052 419 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 SLC6A12P48065 614 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 PLOD1Q02809 727 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-202ENST00000369409 ZP2Q05996 745 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 PTCHD3Q3KNS1 767 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 TCHHL1Q5QJ38 904 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-202ENST00000369409 ASRGL1Q7L266 308 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 SYT13Q7L8C5 426 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 ASB12Q8WXK4 309 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 PYCR2Q96C36 320 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 FBXL8Q96CD0 374 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 TUBB6Q9BUF5 446 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 APOOQ9BUR5 198 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 FOXQ1Q9C009 403 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 ATG10Q9H0Y0 220 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 LRMDAQ9H2I8 198 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 DPEP2Q9H4A9 486 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 SLC32A1Q9H598 525 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 ZNF385DQ9H6B1 395 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 LTB4R2Q9NPC1 389 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 ITM2CQ9NQX7 267 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 TAGLN3Q9UI15 199 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms