RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 GJA1P17302 382 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 PTPN2P17706 415 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 GNPDA1P46926 289 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 SPINT3P49223 89 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 RPIAP49247 311 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 PWP1Q13610 501 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 SKIV2LQ15477 1246 aaKnown RBP12.89□□□□□ -0.35
ECM1-202ENST00000369047 ATP13A5Q4VNC0 1218 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 TIGD2Q4W5G0 525 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 RFTN2Q52LD8 501 aaPredicted RBP12.89□□□□□ -0.35
ECM1-202ENST00000369047 CACHD1Q5VU97 1274 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 BRAT1Q6PJG6 821 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 DPY19L3Q6ZPD9 716 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 RBM23Q86U06 439 aaKnown RBP12.89□□□□□ -0.35
ECM1-202ENST00000369047 TBC1D21Q8IYX1 336 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 IRF7Q92985 503 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 SPATA16Q9BXB7 569 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 SLC12A9Q9BXP2 914 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 SLC32A1Q9H598 525 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 IGFLR1Q9H665 355 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 ZDHHC6Q9H6R6 413 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 RAD18Q9NS91 495 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 PKD2L2Q9NZM6 624 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 AURKCQ9UQB9 309 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 AP3M1Q9Y2T2 418 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 C7orf72A4D263 438 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 CCL16O15467 120 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 CLDN9O95484 217 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 CLPTM1O96005 669 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 KRT6AP02538 564 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 KRT6BP04259 564 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 CYP2A6P11509 494 aaPredicted RBP12.89□□□□□ -0.35
ECM1-202ENST00000369047 VARSP26640 1264 aaKnown RBP12.89□□□□□ -0.35
ECM1-202ENST00000369047 AOAHP28039 575 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 RECQLP46063 649 aaPredicted RBP12.89□□□□□ -0.35
ECM1-202ENST00000369047 KRT6CP48668 564 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 HNMTP50135 292 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 SH3BGRP55822 239 aaPredicted RBP12.89□□□□□ -0.35
ECM1-202ENST00000369047 ADAM15Q13444 863 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 MAP7Q14244 749 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 GBX1Q14549 363 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 COL19A1Q14993 1142 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 NRF1Q16656 503 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 RABL3Q5HYI8 236 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 PLEKHS1Q5SXH7 462 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 DLEU7Q6UYE1 221 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 GDPD4Q6W3E5 623 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 TMEM25Q86YD3 366 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 CHERPQ8IWX8 916 aaKnown RBP12.89□□□□□ -0.35
ECM1-202ENST00000369047 ADGRG5Q8IZF4 528 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 ADGRG2Q8IZP9 1017 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 FAM9CQ8IZT9 166 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 MFSD2AQ8NA29 543 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 OR8J3Q8NGG0 315 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 DNAJB8Q8NHS0 232 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 SLC22A17Q8WUG5 538 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 MAGEB10Q96LZ2 347 aaPredicted RBP12.89□□□□□ -0.35
ECM1-202ENST00000369047 CIB1Q99828 191 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 C9orf16Q9BUW7 83 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 PARVBQ9HBI1 364 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 TDP1Q9NUW8 608 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 MAGEL2Q9UJ55 1249 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 TSR3Q9UJK0 312 aaKnown RBP12.89□□□□□ -0.35
ECM1-202ENST00000369047 PCDHB3Q9Y5E6 796 aa12.89□□□□□ -0.35
ECM1-202ENST00000369047 PABPN1LA6NDY0 278 aaKnown RBP12.88□□□□□ -0.35
ECM1-202ENST00000369047 NUAK1O60285 661 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 IL6P05231 212 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 HIST1H2AGP0C0S8 130 aaPredicted RBP12.88□□□□□ -0.35
ECM1-202ENST00000369047 HIST1H2ADP20671 130 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 AKT1P31749 480 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 CASP2P42575 452 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 SP140Q13342 867 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 ARHGEF7Q14155 803 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 CYP51A1Q16850 503 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 LRRC70Q7Z2Q7 622 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 LEMD2Q8NC56 503 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 USP7Q93009 1102 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 OTUB2Q96DC9 234 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 HIST1H2AHQ96KK5 128 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 SLC29A1Q99808 456 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 HIST1H2AJQ99878 128 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 H2AFJQ9BTM1 129 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 BBS2Q9BXC9 721 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 ACTL8Q9H568 366 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 SFXN1Q9H9B4 322 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 SPHK2Q9NRA0 654 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 SMOXQ9NWM0 555 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 CLDND1Q9NY35 253 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 GMPR2Q9P2T1 348 aaKnown RBP12.88□□□□□ -0.35
ECM1-202ENST00000369047 ANAPC2Q9UJX6 822 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 ZNF490Q9ULM2 529 aaPredicted RBP12.88□□□□□ -0.35
ECM1-202ENST00000369047 HCFC2Q9Y5Z7 792 aa12.88□□□□□ -0.35
ECM1-202ENST00000369047 PIKFYVEQ9Y2I7 2098 aa12.87□□□□□ -0.35
ECM1-202ENST00000369047 TCRBV5S2A0A599 114 aa12.87□□□□□ -0.35
ECM1-202ENST00000369047 LOC730098B7Z3J9 87 aa12.87□□□□□ -0.35
ECM1-202ENST00000369047 NEDD8-MDP1E9PL57 170 aa12.87□□□□□ -0.35
ECM1-202ENST00000369047 MANBAO00462 879 aa12.87□□□□□ -0.35
ECM1-202ENST00000369047 PER2O15055 1255 aa12.87□□□□□ -0.35
ECM1-202ENST00000369047 INPP4BO15327 924 aa12.87□□□□□ -0.35
ECM1-202ENST00000369047 BNIP3LO60238 219 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms