RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 OR6C4Q8NGE1 309 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 ANKRD49Q8WVL7 239 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 SH3KBP1Q96B97 665 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 DHRS4Q9BTZ2 278 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 ABCG4Q9H172 646 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 TRIT1Q9H3H1 467 aaKnown RBP13.54□□□□□ -0.24
TPM3-211ENST00000368531 MVB12BQ9H7P6 319 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 SYTL2Q9HCH5 934 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 SNX15Q9NRS6 342 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 KCNK4Q9NYG8 393 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 ZNF180Q9UJW8 692 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 PLAGL1Q9UM63 463 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 PLAAQ9Y263 795 aa13.54□□□□□ -0.24
TPM3-211ENST00000368531 FRYLO94915 3013 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 CCDC151A5D8V7 595 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 RFPL3O75679 317 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 KRT37O76014 449 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 SNRPAP09012 282 aaKnown RBP13.53□□□□□ -0.24
TPM3-211ENST00000368531 CCDC166P0CW27 439 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 ENO3P13929 434 aaPredicted RBP13.53□□□□□ -0.24
TPM3-211ENST00000368531 ZNF37AP17032 561 aaPredicted RBP13.53□□□□□ -0.24
TPM3-211ENST00000368531 TYRP1P17643 537 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 AMD1P17707 334 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 TYK2P29597 1187 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 ATP5DP30049 168 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 CCSMST1Q4G0I0 132 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 PPM1JQ5JR12 505 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 LGSNQ5TDP6 509 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 TTC23LQ6PF05 361 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 UNC5DQ6UXZ4 953 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 NEK10Q6ZWH5 1172 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 USP53Q70EK8 1073 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 GLRX5Q86SX6 157 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 TBC1D21Q8IYX1 336 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 OR4E2Q8NGC2 313 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 AHCYL2Q96HN2 611 aaKnown RBP13.53□□□□□ -0.24
TPM3-211ENST00000368531 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.53□□□□□ -0.24
TPM3-211ENST00000368531 ZMYND15Q9H091 742 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 VPS11Q9H270 941 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 XKR8Q9H6D3 395 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 TOR4AQ9NXH8 423 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 PSMC3IPQ9P2W1 217 aaPredicted RBP13.53□□□□□ -0.24
TPM3-211ENST00000368531 SLC24A2Q9UI40 661 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 ATXN7L1Q9ULK2 861 aaPredicted RBP13.53□□□□□ -0.24
TPM3-211ENST00000368531 ASXL3Q9C0F0 2248 aa13.53□□□□□ -0.24
TPM3-211ENST00000368531 IQANK1A0A1B0GTG1 560 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 FOXO6A8MYZ6 492 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 RASGRF2O14827 1237 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 MATN4O95460 622 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 C1orf105O95561 183 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 SYF2O95926 243 aaKnown RBP13.52□□□□□ -0.25
TPM3-211ENST00000368531 RPN2P04844 631 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 RPLP0P05388 317 aaKnown RBP13.52□□□□□ -0.25
TPM3-211ENST00000368531 C2P06681 752 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 NUDT17P0C025 328 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 FTH1P19P0C7X4 201 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 CNTFP26441 200 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 NDUFS1P28331 727 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 CRABP2P29373 138 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 SERPINB8P50452 374 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 CLDN6P56747 220 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 CSHL1Q14406 222 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 ZKSCAN8Q15776 578 aaPredicted RBP13.52□□□□□ -0.25
TPM3-211ENST00000368531 DHRS13Q6UX07 377 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 UBE2R2Q712K3 238 aaPredicted RBP13.52□□□□□ -0.25
TPM3-211ENST00000368531 ZNF438Q7Z4V0 828 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 SPRED1Q7Z699 444 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 NKAPQ8N5F7 415 aaKnown RBP13.52□□□□□ -0.25
TPM3-211ENST00000368531 C2orf73Q8N5S3 287 aaPredicted RBP13.52□□□□□ -0.25
TPM3-211ENST00000368531 LMNTD1Q8N9Z9 388 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 OR52E1Q8NGJ3 308 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 OR10G6Q8NH81 332 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 OR5K2Q8NHB8 316 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 LCN9Q8WX39 176 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 LRRN3Q9H3W5 708 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 KIR3DX1Q9H7L2 352 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 POPDC3Q9HBV1 291 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 DLL3Q9NYJ7 618 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 FETUBQ9UGM5 382 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 TLK1Q9UKI8 766 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 ADAMTS6Q9UKP5 1117 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 IKZF3Q9UKT9 509 aa13.52□□□□□ -0.25
TPM3-211ENST00000368531 APOBEC2Q9Y235 224 aaKnown RBP13.52□□□□□ -0.25
TPM3-211ENST00000368531 IGHV1OR21-1A0A087WYE8 117 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 A0A096LPK6 155 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 NPEPPSL1A6NEC2 478 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 ARHGEF33A8MVX0 844 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 EIF3FO00303 357 aaPredicted RBP13.51□□□□□ -0.25
TPM3-211ENST00000368531 CDC7O00311 574 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 OPA1O60313 960 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 PSIP1O75475 530 aaKnown RBP13.51□□□□□ -0.25
TPM3-211ENST00000368531 UBXN7O94888 489 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 WISP3O95389 354 aaPredicted RBP13.51□□□□□ -0.25
TPM3-211ENST00000368531 TSPAN12O95859 305 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 CATP04040 527 aaKnown RBP13.51□□□□□ -0.25
TPM3-211ENST00000368531 ALDOAP04075 364 aaKnown RBP13.51□□□□□ -0.25
TPM3-211ENST00000368531 SLC35E2BP0CK96 405 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 TPBGLP0DKB5 382 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 PNLIPP16233 465 aa13.51□□□□□ -0.25
TPM3-211ENST00000368531 MAP4P27816 1152 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms