RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 ATP1B2P14415 290 aaPredicted RBP13.73□□□□□ -0.21
USF1-202ENST00000368020 CYP2A7P20853 494 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 IGFBP4P22692 258 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 LHCGRP22888 699 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 AOAHP28039 575 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 RPIAP49247 311 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 ZNF33BQ06732 778 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 PHKG1Q16816 387 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 AP5B1Q2VPB7 878 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 CACHD1Q5VU97 1274 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 OR52E8Q6IFG1 317 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 CES5AQ6NT32 575 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 CYP20A1Q6UW02 462 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 Q6ZVU0 165 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 ADIPOR2Q86V24 386 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 PROSER1Q86XN7 944 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 LILRA2Q8N149 483 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 SFRP1Q8N474 314 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 PACRGLQ8N7B6 248 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 OR2A12Q8NGT7 310 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 PROKR1Q8TCW9 393 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 POP5Q969H6 163 aaKnown RBP13.73□□□□□ -0.21
USF1-202ENST00000368020 VOPP1Q96AW1 172 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 TCEAL4Q96EI5 215 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 SLC45A3Q96JT2 553 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 TMEM79Q9BSE2 394 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 ZSCAN5AQ9BUG6 496 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 SLC12A9Q9BXP2 914 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 S1PR5Q9H228 398 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 CCM2LQ9NUG4 571 aaPredicted RBP13.73□□□□□ -0.21
USF1-202ENST00000368020 SNX13Q9Y5W8 968 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 DHRS12A0PJE2 317 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 UPK3BL1B0FP48 263 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 UPK3BL2E5RIL1 263 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 RNASEH2AO75792 299 aaKnown RBP13.73□□□□□ -0.21
USF1-202ENST00000368020 CLDN9O95484 217 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 UBTFL6P0CB48 400 aaPredicted RBP13.73□□□□□ -0.21
USF1-202ENST00000368020 AKT1P31749 480 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 GRIA3P42263 894 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 UFM1P61960 85 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 NTHL1P78549 312 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 TLR1Q15399 786 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 ATAT1Q5SQI0 421 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 LY6G5CQ5SRR4 150 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 HID1Q8IV36 788 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 TRAM1L1Q8N609 369 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 SNX31Q8N9S9 440 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 TNIP2Q8NFZ5 429 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 TMEM125Q96AQ2 219 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 GBP5Q96PP8 586 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 CDK15Q96Q40 435 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 KCTD14Q9BQ13 255 aaPredicted RBP13.73□□□□□ -0.21
USF1-202ENST00000368020 SLC39A3Q9BRY0 314 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 CENPKQ9BS16 269 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 OSBPL11Q9BXB4 747 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 SPATA16Q9BXB7 569 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 FAM83DQ9H4H8 585 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 ELOVL2Q9NXB9 296 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 ARL15Q9NXU5 204 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 A8MX80 341 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 RNASEH1O60930 286 aaKnown RBP13.72□□□□□ -0.21
USF1-202ENST00000368020 BMP2P12643 396 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 XPAP23025 273 aaPredicted RBP13.72□□□□□ -0.21
USF1-202ENST00000368020 HTR1EP28566 365 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 LTBRP36941 435 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 GNPDA1P46926 289 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 ZFP36L2P47974 494 aaKnown RBP13.72□□□□□ -0.21
USF1-202ENST00000368020 ATXN3P54252 364 aaPredicted RBP13.72□□□□□ -0.21
USF1-202ENST00000368020 IMPG1Q17R60 797 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 LDLRAP1Q5SW96 308 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 ASTLQ6HA08 431 aaPredicted RBP13.72□□□□□ -0.21
USF1-202ENST00000368020 UBE2R2Q712K3 238 aaPredicted RBP13.72□□□□□ -0.21
USF1-202ENST00000368020 ERMP1Q7Z2K6 904 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 ANKFN1Q8N957 763 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 MCOLN3Q8TDD5 553 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 PPWD1Q96BP3 646 aaKnown RBP13.72□□□□□ -0.21
USF1-202ENST00000368020 MSLNLQ96KJ4 702 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 C1orf50Q9BV19 199 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 IL1RL2Q9HB29 575 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 CMTM6Q9NX76 183 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 CLDND1Q9NY35 253 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 GDE1Q9NZC3 331 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 SLCO3A1Q9UIG8 710 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 SNX6Q9UNH7 406 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 AP4B1Q9Y6B7 739 aa13.72□□□□□ -0.21
USF1-202ENST00000368020 DOCK8Q8NF50 2099 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 PSMD11O00231 422 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 NRG2O14511 850 aaPredicted RBP13.71□□□□□ -0.21
USF1-202ENST00000368020 TNFAIP8O95379 198 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 ADH1CP00326 375 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 IL6P05231 212 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 C7P10643 843 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 ACPPP15309 386 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 HOXB6P17509 224 aaKnown RBP13.71□□□□□ -0.21
USF1-202ENST00000368020 VARSP26640 1264 aaKnown RBP13.71□□□□□ -0.21
USF1-202ENST00000368020 MAPK1P28482 360 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 CCR7P32248 378 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 ABRAXAS2Q15018 415 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 FXNQ16595 210 aa13.71□□□□□ -0.21
USF1-202ENST00000368020 ZNF284Q2VY69 593 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms