RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 NDC1Q9BTX1 674 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 CST1P01037 141 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 CREB1P16220 341 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 BMP7P18075 431 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 CASRP41180 1078 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 ARHGAP40Q5TG30 622 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 LRRC66Q68CR7 880 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 TMEM156Q8N614 296 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 UBR7Q8N806 425 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 TERB1Q8NA31 727 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 SLC22A18Q96BI1 424 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 RUVBL1Q9Y265 456 aaKnown RBP11.38□□□□□ -0.59
SYNE1-204ENST00000367248 FAM25AB3EWG3 89 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 FAM25CB3EWG5 89 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 FAM25GB3EWG6 89 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 POP7O75817 140 aaKnown RBP11.38□□□□□ -0.59
SYNE1-204ENST00000367248 CPN2P22792 545 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 PRRT3Q5FWE3 981 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 AMIGO2Q86SJ2 522 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 FAM110BQ8TC76 370 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 FAM3CQ92520 227 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 ZNF358Q9NW07 568 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 C15orf41Q9Y2V0 281 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 CLCA3PQ9Y6N3 262 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 A0A087WXM4 84 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 FAM159BA6NKW6 160 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 HAS3O00219 553 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 ADSLP30566 484 aaPredicted RBP11.38□□□□□ -0.59
SYNE1-204ENST00000367248 TAS2R41P59536 307 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 CYP27C1Q4G0S4 372 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 WDTC1Q8N5D0 677 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 CLDN19Q8N6F1 224 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 GSDMCQ9BYG8 508 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 LMAN1LQ9HAT1 526 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 SLC17A6Q9P2U8 582 aa11.38□□□□□ -0.59
SYNE1-204ENST00000367248 C9JVG2 144 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 VARSP26640 1264 aaKnown RBP11.37□□□□□ -0.59
SYNE1-204ENST00000367248 RFX4Q33E94 735 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 SAMD14Q8IZD0 417 aaPredicted RBP11.37□□□□□ -0.59
SYNE1-204ENST00000367248 CCM2Q9BSQ5 444 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 ZNF624Q9P2J8 865 aaPredicted RBP11.37□□□□□ -0.59
SYNE1-204ENST00000367248 TMEM150CB9EJG8 249 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 FAM72CH0Y354 149 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 TNFRSF10BO14763 440 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 CCKBRP32239 447 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 FAM72AQ5TYM5 149 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 FAM72DQ6L9T8 149 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 Q6ZVL8 140 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 FAM72BQ86X60 149 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 ZSCAN1Q8NBB4 408 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 FAM98AQ8NCA5 519 aaKnown RBP11.37□□□□□ -0.59
SYNE1-204ENST00000367248 SMARCD2Q92925 531 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 HHIPQ96QV1 700 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 SAMD4AQ9UPU9 718 aaKnown RBP11.37□□□□□ -0.59
SYNE1-204ENST00000367248 GMPPBQ9Y5P6 360 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 A0A0D9SEW6 157 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 ENO4A6NNW6 628 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 B4GALT2O60909 372 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 TALDO1P37837 337 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 UGT2B15P54855 530 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 CSTF1Q05048 431 aaKnown RBP11.37□□□□□ -0.59
SYNE1-204ENST00000367248 NEDD8Q15843 81 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 CYP2U1Q7Z449 544 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.37□□□□□ -0.59
SYNE1-204ENST00000367248 TMEM130Q8N3G9 435 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 CNTD1Q8N815 330 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 PLK4O00444 970 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 HEPACAMQ14CZ8 416 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 AAGABQ6PD74 315 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 PSKH2Q96QS6 385 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 SLC2A4RGQ9NR83 387 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 MAFFQ9ULX9 164 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 B3GALT2O43825 422 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 CTSAP10619 480 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 CST5P28325 142 aaPredicted RBP11.37□□□□□ -0.59
SYNE1-204ENST00000367248 STC1P52823 247 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 EIF4HQ15056 248 aaKnown RBP11.37□□□□□ -0.59
SYNE1-204ENST00000367248 QPCTQ16769 361 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 ZNF783Q6ZMS7 281 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 NEK10Q6ZWH5 1172 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 GSTCDQ8NEC7 633 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 CENPIQ92674 756 aaPredicted RBP11.37□□□□□ -0.59
SYNE1-204ENST00000367248 HLA-CQ95604 372 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 LENG8Q96PV6 779 aaPredicted RBP11.37□□□□□ -0.59
SYNE1-204ENST00000367248 MTERF1Q99551 399 aaKnown RBP11.37□□□□□ -0.59
SYNE1-204ENST00000367248 RBCK1Q9BYM8 510 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 HAPLN2Q9GZV7 340 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 ANKHQ9HCJ1 492 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 RBM7Q9Y580 266 aaKnown RBP11.37□□□□□ -0.59
SYNE1-204ENST00000367248 TSPAN19P0C672 248 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 RPS14P62263 151 aaKnown RBP11.37□□□□□ -0.59
SYNE1-204ENST00000367248 SPIBQ01892 262 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 TBC1D25Q3MII6 688 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 ZIK1Q3SY52 487 aaPredicted RBP11.37□□□□□ -0.59
SYNE1-204ENST00000367248 PROSER1Q86XN7 944 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 DEFB123Q8N688 67 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 SMPDL3AQ92484 453 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 ARMC5Q96C12 935 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 RETREG1Q9H6L5 497 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 HCFC1R1Q9NWW0 138 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms