RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 SLC39A3Q9BRY0 314 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 ZNF536O15090 1300 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 FAM234BA2RU67 622 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 TTC34A8MYJ7 566 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 RPL17P18621 184 aaKnown RBP15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 SVOPLQ8N434 492 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 RPL10LQ96L21 214 aaKnown RBP15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 CCDC115Q96NT0 180 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 DHX33Q9H6R0 707 aaKnown RBP15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 RPL26L1Q9UNX3 145 aaKnown RBP15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 FKBP7Q9Y680 259 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 MST1RQ04912 1400 aa15.46■□□□□ 0.06
NUCKS1-201ENST00000367142 A0A1W2PPM1 405 aa15.46■□□□□ 0.06
NUCKS1-201ENST00000367142 WNT9AO14904 365 aa15.46■□□□□ 0.06
NUCKS1-201ENST00000367142 TULP3O75386 442 aa15.46■□□□□ 0.06
NUCKS1-201ENST00000367142 OR7A10O76100 309 aa15.46■□□□□ 0.06
NUCKS1-201ENST00000367142 ADH5P11766 374 aa15.46■□□□□ 0.06
NUCKS1-201ENST00000367142 CSTF2P33240 577 aaKnown RBP eCLIP15.46■□□□□ 0.068e-7■■■□□ 16
NUCKS1-201ENST00000367142 RIN1Q13671 783 aa15.46■□□□□ 0.06
NUCKS1-201ENST00000367142 GRIK5Q16478 980 aa15.46■□□□□ 0.06
NUCKS1-201ENST00000367142 DNAJB7Q7Z6W7 309 aaPredicted RBP15.46■□□□□ 0.06
NUCKS1-201ENST00000367142 CAND1Q86VP6 1230 aaKnown RBP15.46■□□□□ 0.06
NUCKS1-201ENST00000367142 ZNF639Q9UID6 485 aa15.46■□□□□ 0.06
NUCKS1-201ENST00000367142 PCDHGC3Q9UN70 934 aa15.46■□□□□ 0.06
NUCKS1-201ENST00000367142 LRRC10BA6NIK2 292 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 ZBTB22O15209 634 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 KLRC4O43908 158 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 PGRP06401 933 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 E2F2Q14209 437 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 C2orf27AQ580R0 203 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 WDR45BQ5MNZ6 344 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 LDB1Q86U70 411 aaPredicted RBP15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 AKAP14Q86UN6 197 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 OR4K17Q8NGC6 315 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 ZNF570Q96NI8 536 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 WDR55Q9H6Y2 383 aaPredicted RBP15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 C19orf25Q9UFG5 118 aaPredicted RBP15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 SPIN1Q9Y657 262 aaPredicted RBP15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 NEMP2A6NFY4 417 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 RLN2P04090 185 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 MTHFD1P11586 935 aaKnown RBP15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 CSKP41240 450 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 SLC6A9P48067 706 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 PITPNAQ00169 270 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 KLF10Q13118 480 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 CYP2U1Q7Z449 544 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 KIAA1143Q96AT1 154 aaPredicted RBP15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 SLC17A7Q9P2U7 560 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 FBXO9Q9UK97 447 aaPredicted RBP15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 AK5Q9Y6K8 562 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 ILVBLA1L0T0 632 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 OR14I1A6ND48 311 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 OR3A3P47888 321 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 OR3A2P47893 321 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 DNM1P34Q6PK57 102 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 TRABD2AQ86V40 505 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 IFNL1Q8IU54 200 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 FUKQ8N0W3 1084 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 SETD7Q8WTS6 366 aaKnown RBP15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 WASF3Q9UPY6 502 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 AGR2O95994 175 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 PRKCZQ05513 592 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 NUDT13Q86X67 352 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 ECHDC2Q86YB7 292 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 TMEM156Q8N614 296 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 SIPA1Q96FS4 1042 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 NUSAP1Q9BXS6 441 aaKnown RBP15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 TPK1Q9H3S4 243 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 ITGB1BP2Q9UKP3 347 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 COMMD3-BMI1R4GMX3 469 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 USP2O75604 605 aaPredicted RBP15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 THOC7Q6I9Y2 204 aaKnown RBP15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 NANOGNBQ7Z5D8 188 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 ZNF615Q8N8J6 731 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 ZNF347Q96SE7 839 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 KXD1Q9BQD3 176 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 OR51V1Q9H2C8 321 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 C1orf109Q9NX04 203 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 GDAP2Q9NXN4 497 aa15.45■□□□□ 0.06
NUCKS1-201ENST00000367142 PRR5-ARHGAP8B1AHC4 643 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 TFECO14948 347 aaPredicted RBP15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 GADD45GO95257 159 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 MMP8P22894 467 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 TXNL4AP83876 142 aaKnown RBP15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 ARHGAP8P85298 464 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 FAM47BQ8NA70 645 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 CAMKVQ8NCB2 501 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 ZNF548Q8NEK5 533 aaPredicted RBP15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 UFD1Q92890 307 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 GTPBP3Q969Y2 492 aaKnown RBP15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 DPEP3Q9H4B8 488 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 TAS2R7Q9NYW3 318 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 C4BPAP04003 597 aaKnown RBP15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 LBX2Q6XYB7 198 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 HFE2Q6ZVN8 426 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 KCT2Q8NC54 265 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 KLRF1Q9NZS2 232 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 GLS2Q9UI32 602 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 A0A0J9YVX5 310 aa15.44■□□□□ 0.06
NUCKS1-201ENST00000367142 PIAS1O75925 651 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms