RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 REM1O75628 298 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 MYF6P23409 242 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 TAS2R41P59536 307 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 C5orf22Q49AR2 442 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 DCST1Q5T197 706 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 DEF8Q6ZN54 512 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 CLEC4CQ8WTT0 213 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 NDRG1Q92597 394 aaKnown RBP11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 MCCC1Q96RQ3 725 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 RANBP9Q96S59 729 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 TCF25Q9BQ70 676 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 PTGFRNQ9P2B2 879 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 WBP4O75554 376 aaKnown RBP11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 ARSFP54793 590 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 PSMG2Q969U7 264 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 CALML5Q9NZT1 146 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 PEPDP12955 493 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 MPPE1Q53F39 396 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 MACC1Q6ZN28 852 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 EMID1Q96A84 441 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 ACDQ96AP0 544 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 NECTIN3Q9NQS3 549 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 SLC17A6Q9P2U8 582 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 HSPE1-MOB4S4R3N1 261 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 EME2A4GXA9 379 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 CASKO14936 926 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 ANXA4P09525 319 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 KLHL32Q96NJ5 620 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 AARSD1Q9BTE6 412 aaKnown RBP11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 DCSTAMPQ9H295 470 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 TM9SF3Q9HD45 589 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 RAB23Q9ULC3 237 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 ELFN1P0C7U0 828 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 CCNYL3P0C7X3 344 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 COL6A1P12109 1028 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 NCK1P16333 377 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 MTPNP58546 118 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZNHIT3Q15649 155 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 B3GNT9Q6UX72 402 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 TMEM199Q8N511 208 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 MOSPD2Q8NHP6 518 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 KLHL31Q9H511 634 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 NHSQ6T4R5 1651 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 NBNO60934 754 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 C9P02748 559 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 MT-ND1P03886 318 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 T-ENOLP0DO92 83 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 HSPA7P48741 367 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZNF514Q96K75 400 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 SEZ6LQ9BYH1 1024 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 TRIM8Q9BZR9 551 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 C3orf14Q9HBI5 128 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 ITM2CQ9NQX7 267 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 RASSF1Q9NS23 344 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 SCML2Q9UQR0 700 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 CD36P16671 472 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 SP2Q02086 613 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 ARHGAP1Q07960 439 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 IFNLR1Q8IU57 520 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 GRIN3AQ8TCU5 1115 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 KCNJ9Q92806 393 aa11.6□□□□□ -0.55
CDC42BPA-202ENST00000366764 FAM92AA1XBS5 289 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZNF45Q02386 682 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 SYPL2Q5VXT5 272 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 DOK6Q6PKX4 331 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 NETO2Q8NC67 525 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 SLC22A4Q9H015 551 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 ARMC1Q9NVT9 282 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 DOLKQ9UPQ8 538 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 AP3D1O14617 1153 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 NDUFV1P49821 464 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 RBM20Q5T481 1227 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 TRPM4Q8TD43 1214 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 C1orf74Q96LT6 269 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 PHF12Q96QT6 1004 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 PCDHB3Q9Y5E6 796 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 GRM6O15303 877 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 SERINC3Q13530 473 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 SPRED3Q2MJR0 410 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 GATA6Q92908 595 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 C1GALT1C1Q96EU7 318 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 PRICKLE1Q96MT3 831 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 TRIB3Q96RU7 358 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 RPF2Q9H7B2 306 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 MRPL17Q9NRX2 175 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 FAM120CQ9NX05 1096 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 TDRKHQ9Y2W6 561 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 SLC35E2BP0CK96 405 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 BUD31P41223 144 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 GUCA1AP43080 201 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 TBC1D14Q9P2M4 693 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 ADAMTS6Q9UKP5 1117 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 BLVRAP53004 296 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 PRR5P85299 388 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 KIAA1614Q5VZ46 1190 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 LCN8Q6JVE9 175 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 CCDC36Q8IYA8 594 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 CLHC1Q8NHS4 586 aa11.59□□□□□ -0.55
CDC42BPA-202ENST00000366764 EEF1AKMT1Q8WVE0 214 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms