RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 DHRS1Q96LJ7 313 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 TRUB2O95900 331 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 HDCP19113 662 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 APLP1P51693 650 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 GSCP56915 257 aaPredicted RBP13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 SLC39A12Q504Y0 691 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 ACSBG2Q5FVE4 666 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 GTF2IRD2BQ6EKJ0 949 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 GTF2IRD2Q86UP8 949 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 VIPP01282 170 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 POU2F1P14859 743 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 CD247P20963 164 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 PPP3CAQ08209 521 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 KCTD19Q17RG1 926 aaPredicted RBP13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 PDSS1Q5T2R2 415 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 MRPL41Q8IXM3 137 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 ZSCAN1Q8NBB4 408 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 LINGO1Q96FE5 620 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 CAMK1GQ96NX5 476 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 MED31Q9Y3C7 131 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 TPRP12270 2363 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 MYO5BQ9ULV0 1848 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 CXCR3P49682 368 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 CDK10Q15131 360 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 ZNF627Q7L945 461 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 CMC1Q7Z7K0 106 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 CAND1Q86VP6 1230 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 CREB3L1Q96BA8 519 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 ROPN1LQ96C74 230 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 RGCCQ9H4X1 137 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 RANBP3Q9H6Z4 567 aaPredicted RBP13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 ADGRB3O60242 1522 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 E5RJQ4 531 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 PRAMEF12O95522 483 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 NUDT7P0C024 238 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 PRKACBP22694 351 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 MARCKSL1P49006 195 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 FIBCD1Q8N539 461 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 SDHAF3Q9NRP4 125 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 PCDHGB6Q9Y5F9 930 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 GSTT2P0CG29 244 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 LIMK2P53671 638 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 PARGQ86W56 976 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 LENG8Q96PV6 779 aaPredicted RBP13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 GAL3ST1Q99999 423 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 CFAP97Q9P2B7 532 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 ZNF490Q9ULM2 529 aaPredicted RBP13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 APC2O95996 2303 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 hCG_2039718K7EN88 272 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 GCNT6Q5T4J0 391 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 BRD7Q9NPI1 651 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 ZNF225Q9UK10 706 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 TIMM8BQ9Y5J9 83 aaPredicted RBP13□□□□□ -0.33
SRGAP3-201ENST00000360413 S100A7P31151 101 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 HTR2BP41595 481 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 PARP15Q460N3 678 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 ANKRD52Q8NB46 1076 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 SLC2A14Q8TDB8 520 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 IL25Q9H293 177 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 CD163L1Q9NR16 1453 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 C2orf74A8MZ97 194 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 ALOX15BO15296 676 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 SSX4O60224 188 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 SCGB2B2Q4G0G5 96 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 FAM156AQ8NDB6 213 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 SLC38A4Q969I6 547 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 SLC22A18Q96BI1 424 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 KXD1Q9BQD3 176 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 DHX33Q9H6R0 707 aaKnown RBP13□□□□□ -0.33
SRGAP3-201ENST00000360413 SEC14L4Q9UDX3 406 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 NFATC1O95644 943 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 LINC00471Q8N535 108 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 WACQ9BTA9 647 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 C5orf60A6NFR6 353 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 IGFBP4P22692 258 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 LHFPL3Q86UP9 236 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 DEFB106AQ8N104 65 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 HDAC10Q969S8 669 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 TCEAL4Q96EI5 215 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 ABCD2Q9UBJ2 740 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 ERAL1O75616 437 aaKnown RBP13□□□□□ -0.33
SRGAP3-201ENST00000360413 IFNW1P05000 195 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 TFPTP0C1Z6 253 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 IL7P13232 177 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 SLC30A6Q6NXT4 461 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 TWIST2Q8WVJ9 160 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 ASB15Q8WXK1 588 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 RAB9BQ9NP90 201 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 GRXCR2A6NFK2 248 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 CYP3A4P08684 503 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 B3GNT4Q9C0J1 378 aa13□□□□□ -0.33
SRGAP3-201ENST00000360413 SRPRAP08240 638 aaKnown RBP12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 NPTX1Q15818 432 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 IQCCQ4KMZ1 466 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 ALKBH2Q6NS38 261 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 UBE2R2Q712K3 238 aaPredicted RBP12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 C11orf65Q8NCR3 313 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 FUZQ9BT04 418 aa12.99□□□□□ -0.33
SRGAP3-201ENST00000360413 EQTNQ9NQ60 294 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms