RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 CYP2U1Q7Z449 544 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 CNTD1Q8N815 330 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 PSMG2Q969U7 264 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 HEPHQ9BQS7 1158 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 CALML5Q9NZT1 146 aa18.1■□□□□ 0.49
SHANK1-202ENST00000359082 POP4O95707 220 aaKnown RBP18.09■□□□□ 0.49
SHANK1-202ENST00000359082 AP2S1P53680 142 aaPredicted RBP18.09■□□□□ 0.49
SHANK1-202ENST00000359082 SCN1BQ07699 218 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 NODALQ96S42 347 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 DISP2A7MBM2 1401 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 PITPNM1O00562 1244 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 SLC31A1O15431 190 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 KERAO60938 352 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 LRCH4O75427 683 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 MAPK14Q16539 360 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 CAND1Q86VP6 1230 aaKnown RBP18.09■□□□□ 0.49
SHANK1-202ENST00000359082 HERVK_113Q902F9 699 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 C12orf66Q96MD2 445 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 SLC25A51Q9H1U9 297 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 SLC28A3Q9HAS3 691 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 WNT7AO00755 349 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 CSN2P05814 226 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 IL7RP16871 459 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 ILF3Q12906 894 aaKnown RBP eCLIP18.09■□□□□ 0.49
SHANK1-202ENST00000359082 IFI44LQ53G44 452 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 CERS6Q6ZMG9 384 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 IQCHQ86VS3 1027 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 FBXO22Q8NEZ5 403 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 GRHL3Q8TE85 626 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 CENPNQ96H22 339 aaPredicted RBP18.09■□□□□ 0.49
SHANK1-202ENST00000359082 MROH2AA6NES4 1674 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 CWF19L1Q69YN2 538 aaKnown RBP18.09■□□□□ 0.49
SHANK1-202ENST00000359082 DGLUCYQ7Z3D6 616 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 ANKFN1Q8N957 763 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 LENG8Q96PV6 779 aaPredicted RBP18.09■□□□□ 0.49
SHANK1-202ENST00000359082 TTYH1Q9H313 450 aaPredicted RBP18.09■□□□□ 0.49
SHANK1-202ENST00000359082 IL1RAPQ9NPH3 570 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 SNTG1Q9NSN8 517 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 SLC38A8A6NNN8 435 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 C8GP07360 202 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 CCR3P51677 355 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 OR8H3Q8N146 312 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 GPR151Q8TDV0 419 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 UNC93B1Q9H1C4 597 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 MCCC2Q9HCC0 563 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 ABI3Q9P2A4 366 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 BAIAP2Q9UQB8 552 aa18.09■□□□□ 0.49
SHANK1-202ENST00000359082 C9IYK1 514 aa18.08■□□□□ 0.49
SHANK1-202ENST00000359082 PDCD5O14737 125 aa18.08■□□□□ 0.49
SHANK1-202ENST00000359082 UBXN7O94888 489 aa18.08■□□□□ 0.49
SHANK1-202ENST00000359082 PRDX6P30041 224 aa18.08■□□□□ 0.49
SHANK1-202ENST00000359082 GJA9P57773 515 aa18.08■□□□□ 0.49
SHANK1-202ENST00000359082 DUSP28Q4G0W2 176 aa18.08■□□□□ 0.49
SHANK1-202ENST00000359082 PDPRQ8NCN5 879 aa18.08■□□□□ 0.49
SHANK1-202ENST00000359082 TNFRSF25Q93038 417 aa18.08■□□□□ 0.49
SHANK1-202ENST00000359082 SLC25A36Q96CQ1 311 aa18.08■□□□□ 0.49
SHANK1-202ENST00000359082 PEX2P28328 305 aa18.08■□□□□ 0.49
SHANK1-202ENST00000359082 CCKBRP32239 447 aa18.08■□□□□ 0.49
SHANK1-202ENST00000359082 FUT10Q6P4F1 479 aa18.08■□□□□ 0.49
SHANK1-202ENST00000359082 YIPF4Q9BSR8 244 aa18.08■□□□□ 0.49
SHANK1-202ENST00000359082 NEURL4Q96JN8 1562 aa18.08■□□□□ 0.49
SHANK1-202ENST00000359082 SAGE2PA6NJ88 616 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 SNX4O95219 450 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 RENP00797 406 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 RPLP0P05388 317 aaKnown RBP18.08■□□□□ 0.48
SHANK1-202ENST00000359082 NDST2P52849 883 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 IRF9Q00978 393 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 CHAF1BQ13112 559 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 TAF1AQ15573 450 aaPredicted RBP18.08■□□□□ 0.48
SHANK1-202ENST00000359082 PLD4Q96BZ4 506 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 B3GNT4Q9C0J1 378 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 DHX33Q9H6R0 707 aaKnown RBP18.08■□□□□ 0.48
SHANK1-202ENST00000359082 EIF3KQ9UBQ5 218 aaKnown RBP18.08■□□□□ 0.48
SHANK1-202ENST00000359082 ASLP04424 464 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 CSTF1Q05048 431 aaKnown RBP18.08■□□□□ 0.48
SHANK1-202ENST00000359082 ABCA11PQ4W5N1 156 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 TNFAIP8L2Q6P589 184 aaPredicted RBP18.08■□□□□ 0.48
SHANK1-202ENST00000359082 CHRDL2Q6WN34 429 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 MOCS1Q9NZB8 636 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 ZNF180Q9UJW8 692 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 PDE10AQ9Y233 779 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 CPQQ9Y646 472 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 PITPNAQ00169 270 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 SLC9B1Q4ZJI4 515 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 PRSS55Q6UWB4 352 aaPredicted RBP18.08■□□□□ 0.48
SHANK1-202ENST00000359082 HDDC3Q8N4P3 179 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 OR6K6Q8NGW6 343 aa18.08■□□□□ 0.48
SHANK1-202ENST00000359082 TOR1BO14657 336 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 GSTT2BP0CG30 244 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 ZNF20P17024 532 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 TEAD4Q15561 434 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 C7orf61Q8IZ16 206 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 ZFP3Q96NJ6 502 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 CYP2S1Q96SQ9 504 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 RPL17P18621 184 aaKnown RBP18.07■□□□□ 0.48
SHANK1-202ENST00000359082 EIPR1Q53HC9 387 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 PDE12Q6L8Q7 609 aaKnown RBP18.07■□□□□ 0.48
SHANK1-202ENST00000359082 TMEM214Q6NUQ4 689 aaKnown RBP18.07■□□□□ 0.48
SHANK1-202ENST00000359082 GPALPP1Q8IXQ4 340 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 ROPN1LQ96C74 230 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms