RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 POLG2Q9UHN1 485 aa11.7□□□□□ -0.54
SYN3-202ENST00000358763 H3BM21 787 aa11.7□□□□□ -0.54
SYN3-202ENST00000358763 RNGTTO60942 597 aaKnown RBP11.7□□□□□ -0.54
SYN3-202ENST00000358763 RASSF9O75901 435 aa11.7□□□□□ -0.54
SYN3-202ENST00000358763 PKNOX1P55347 436 aa11.7□□□□□ -0.54
SYN3-202ENST00000358763 MRPS21P82921 87 aaKnown RBP11.7□□□□□ -0.54
SYN3-202ENST00000358763 TTC31Q49AM3 519 aaPredicted RBP11.7□□□□□ -0.54
SYN3-202ENST00000358763 CYB5D1Q6P9G0 228 aa11.7□□□□□ -0.54
SYN3-202ENST00000358763 NEK10Q6ZWH5 1172 aa11.7□□□□□ -0.54
SYN3-202ENST00000358763 METTL6Q8TCB7 284 aa11.7□□□□□ -0.54
SYN3-202ENST00000358763 MCOLN3Q8TDD5 553 aa11.7□□□□□ -0.54
SYN3-202ENST00000358763 MRGPRX1Q96LB2 322 aa11.7□□□□□ -0.54
SYN3-202ENST00000358763 RAB3IPQ96QF0 476 aaPredicted RBP11.7□□□□□ -0.54
SYN3-202ENST00000358763 TM7SF3Q9NS93 570 aa11.7□□□□□ -0.54
SYN3-202ENST00000358763 FFAR3O14843 346 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 GPR42O15529 346 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 MATN4O95460 622 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 CHEK2O96017 543 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 OTCP00480 354 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 ALDOCP09972 364 aaKnown RBP11.69□□□□□ -0.54
SYN3-202ENST00000358763 ITPKAP23677 461 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 MAP4P27816 1152 aaKnown RBP11.69□□□□□ -0.54
SYN3-202ENST00000358763 PPP2CBP62714 309 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 RPS21P63220 83 aaKnown RBP11.69□□□□□ -0.54
SYN3-202ENST00000358763 PPP2CAP67775 309 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 SLC25A3Q00325 362 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 SGCGQ13326 291 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 CUL3Q13618 768 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 PTCHD3Q3KNS1 767 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 ZNF658BQ4V348 819 aaPredicted RBP11.69□□□□□ -0.54
SYN3-202ENST00000358763 XKR5Q6UX68 686 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 Q6ZS52 159 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 MILR1Q7Z6M3 343 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 SLC22A15Q8IZD6 547 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 CPSF7Q8N684 471 aaKnown RBP11.69□□□□□ -0.54
SYN3-202ENST00000358763 CMTM5Q96DZ9 223 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 EPHX3Q9H6B9 360 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 WDR26Q9H7D7 661 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 GSC2O15499 205 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 VEGFDO43915 354 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 PEX11AO75192 247 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 WDR47O94967 919 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 EPB42P16452 691 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 NDUFV2P19404 249 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 NME5P56597 212 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 CCINQ13939 588 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 FAM83HQ6ZRV2 1179 aaPredicted RBP11.69□□□□□ -0.54
SYN3-202ENST00000358763 GK5Q6ZS86 529 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 CHSY3Q70JA7 882 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 TP53I13Q8NBR0 393 aaPredicted RBP11.69□□□□□ -0.54
SYN3-202ENST00000358763 SPDYE1Q8NFV5 336 aaPredicted RBP11.69□□□□□ -0.54
SYN3-202ENST00000358763 KCNV2Q8TDN2 545 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 MCUR1Q96AQ8 359 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 TCRBV21S2A2A0A5A6 115 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 SLC16A5O15375 505 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 SLC31A1O15431 190 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 PSIP1O75475 530 aaKnown RBP11.69□□□□□ -0.54
SYN3-202ENST00000358763 ACADMP11310 421 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 HMOX2P30519 316 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 C11orf96Q7Z7L8 435 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 OR2T11Q8NH01 316 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 HMGCLL1Q8TB92 370 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 SLC45A3Q96JT2 553 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 CDX2Q99626 313 aaPredicted RBP11.69□□□□□ -0.54
SYN3-202ENST00000358763 NUSAP1Q9BXS6 441 aaKnown RBP11.69□□□□□ -0.54
SYN3-202ENST00000358763 SLC17A9Q9BYT1 436 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 FBRSQ9HAH7 460 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 SLC23A2Q9UGH3 650 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 RNF11Q9Y3C5 154 aa11.69□□□□□ -0.54
SYN3-202ENST00000358763 LOC730098B7Z3J9 87 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 CATP04040 527 aaKnown RBP11.68□□□□□ -0.54
SYN3-202ENST00000358763 HGFP14210 728 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 EPORP19235 508 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 CDKL1Q00532 357 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 SMAD2Q15796 467 aaKnown RBP11.68□□□□□ -0.54
SYN3-202ENST00000358763 TMEM259Q4ZIN3 620 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 IL27RAQ6UWB1 636 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 PPFIBP2Q8ND30 876 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 OR9I1Q8NGQ6 314 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 HLA-CQ95604 372 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 CLPTM1LQ96KA5 538 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 C1QTNF2Q9BXJ5 285 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 SLC32A1Q9H598 525 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 SLC22A14Q9Y267 594 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 LIN7AO14910 233 aaPredicted RBP11.68□□□□□ -0.54
SYN3-202ENST00000358763 IGFALSP35858 605 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 AP1S2P56377 157 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 TFF2Q03403 129 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 KIF19Q2TAC6 998 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 NEK5Q6P3R8 708 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 HORMAD1Q86X24 394 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 RASGRP3Q8IV61 690 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 LMNTD1Q8N9Z9 388 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 FAM13CQ8NE31 585 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 HMGB4Q8WW32 186 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 FAM131CQ96AQ9 280 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 ZNF514Q96K75 400 aaPredicted RBP11.68□□□□□ -0.54
SYN3-202ENST00000358763 FOPNLQ96NB1 174 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 PSMD13Q9UNM6 376 aa11.68□□□□□ -0.54
SYN3-202ENST00000358763 AIM2O14862 343 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms