RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 PPP3CCP48454 512 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 ADAM17P78536 824 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 EMX2Q04743 252 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 FOXM1Q08050 763 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 USP41Q3LFD5 358 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 PDE12Q6L8Q7 609 aaKnown RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 SYT12Q8IV01 421 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 UBE2J2Q8N2K1 259 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 PGBD5Q8N414 524 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 SVOPQ8N4V2 548 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 PDPRQ8NCN5 879 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 OR13F1Q8NGS4 319 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 SLC22A17Q8WUG5 538 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 FAR1Q8WVX9 515 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 SH3YL1Q96HL8 342 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF347Q96SE7 839 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 DERL2Q9GZP9 239 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 TPK1Q9H3S4 243 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 C8orf4Q9NR00 106 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 GKN1Q9NS71 199 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 OSER1Q9NX31 292 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 ZIM2Q9NZV7 527 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 PCTPQ9UKL6 214 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 IKZF3Q9UKT9 509 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 SARDHQ9UL12 918 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 OGDHLQ9ULD0 1010 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 GIT1Q9Y2X7 761 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 PNMA8CA0A1B0GUJ8 204 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 A8MV72 311 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 HHLA1C9JL84 531 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 H0YAE9 185 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 DLGAP1O14490 977 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 PRMT5O14744 637 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 ADAM23O75077 832 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 FGF4P08620 206 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 OGNP20774 298 aaKnown RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 GALNT1Q10472 559 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 PCBP1Q15365 356 aaKnown RBP eCLIP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 UPP1Q16831 310 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 C9orf131Q5VYM1 1079 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 CYHR1Q6ZMK1 362 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 ADAMTSL2Q86TH1 951 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 AKAP14Q86UN6 197 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 ZFAND4Q86XD8 727 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 HIPK1Q86Z02 1210 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 RAVER1Q8IY67 606 aaKnown RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 Q8N9G6 341 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 CHDHQ8NE62 594 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 OR5K1Q8NHB7 308 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 HDAC2Q92769 488 aaKnown RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 PROX1Q92786 737 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 DMRTB1Q96MA1 342 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 UHRF1Q96T88 793 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 NUSAP1Q9BXS6 441 aaKnown RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 YTHDF1Q9BYJ9 559 aaKnown RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 ATG10Q9H0Y0 220 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 EHD3Q9NZN3 535 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 LRFN2Q9ULH4 789 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 WDR37Q9Y2I8 494 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 TNPO3Q9Y5L0 923 aaKnown RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 THSD7AQ9UPZ6 1657 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF638Q14966 1978 aaKnown RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 GNG14A0A1W2PPG7 69 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 TAF4O00268 1085 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 INSIG1O15503 277 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 AIREO43918 545 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 SERPINB7O75635 380 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 PAPSS2O95340 614 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 LCKP06239 509 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 COX7A2P14406 83 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 ITGALP20701 1170 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 HOXD12P35452 270 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 SOAT1P35610 550 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 DEFA1P59665 94 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 DEFA3P59666 94 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 COPZ1P61923 177 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF33AQ06730 810 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 RAB41Q5JT25 222 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 LRRC73Q5JTD7 316 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 GPR156Q8NFN8 814 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 MED8Q96G25 268 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 KCNC2Q96PR1 638 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 NUAK2Q9H093 628 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 PRDM5Q9NQX1 630 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 ABCD2Q9UBJ2 740 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 DUSP12Q9UNI6 340 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 TLR6Q9Y2C9 796 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 FCF1Q9Y324 198 aaKnown RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 TESMINQ9Y4I5 508 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 CPQQ9Y646 472 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 MGAMO43451 1857 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 HTR3EA5X5Y0 456 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 FAM155AB1AL88 458 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 LOC730098B7Z3J9 87 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 OPN1SWP03999 348 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 ALPLP05186 524 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 PFKLP17858 780 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 GSTM2P28161 218 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 GKP32189 559 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 GJA5P36382 358 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms