RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 B4GALT6Q9UBX8 382 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 COMMD3-BMI1R4GMX3 469 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 SEC22BO75396 215 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 ANXA5P08758 320 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 EBLN1P0CF75 366 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 KIAA0040Q15053 153 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 CPSF6Q16630 551 aaKnown RBP eCLIP15.51■□□□□ 0.07
PHTF1-201ENST00000357783 SLC44A4Q53GD3 710 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 CARD16Q5EG05 197 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 DNAJC14Q6Y2X3 702 aaPredicted RBP15.51■□□□□ 0.07
PHTF1-201ENST00000357783 CCDC149Q6ZUS6 474 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 OTOP2Q7RTS6 562 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 PROSER1Q86XN7 944 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 RGL4Q8IZJ4 473 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 DTWD1Q8N5C7 304 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 KRTCAP2Q8N6L1 136 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 CLHC1Q8NHS4 586 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 SLC13A3Q8WWT9 602 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 RMND5BQ96G75 393 aaPredicted RBP15.51■□□□□ 0.07
PHTF1-201ENST00000357783 MCCC1Q96RQ3 725 aaPredicted RBP15.51■□□□□ 0.07
PHTF1-201ENST00000357783 BRD9Q9H8M2 597 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 LRTM1Q9HBL6 345 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 VAPAQ9P0L0 249 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 TRPS1Q9UHF7 1281 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 PDE10AQ9Y233 779 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 MYRFQ9Y2G1 1151 aa15.51■□□□□ 0.07
PHTF1-201ENST00000357783 EI24O14681 340 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 GRM6O15303 877 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 RPL10P27635 214 aaKnown RBP15.5■□□□□ 0.07
PHTF1-201ENST00000357783 GGT5P36269 586 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 GNPDA1P46926 289 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 PTPN5P54829 565 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 LILRA6Q6PI73 481 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 UBE2R2Q712K3 238 aaPredicted RBP15.5■□□□□ 0.07
PHTF1-201ENST00000357783 TBC1D21Q8IYX1 336 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 CHCHD4Q8N4Q1 142 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 TCEAL4Q96EI5 215 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 RNF145Q96MT1 663 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 ADI1Q9BV57 179 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 NTMT1Q9BV86 223 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 DPY30Q9C005 99 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 ACTR8Q9H981 624 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 MAGEL2Q9UJ55 1249 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 PADI4Q9UM07 663 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 NEUROG3Q9Y4Z2 214 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 PCDHB3Q9Y5E6 796 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 KANSL1LA0AUZ9 987 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 H3BNH8 94 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 IFRD1O00458 451 aaPredicted RBP15.5■□□□□ 0.07
PHTF1-201ENST00000357783 ACOX3O15254 700 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 MTX2O75431 263 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 KCNH1O95259 989 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 CBSLP0DN79 551 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 UMPSP11172 480 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 AKT1P31749 480 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 CBSP35520 551 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 NR1H2P55055 460 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 BOP1Q14137 746 aaKnown RBP15.5■□□□□ 0.07
PHTF1-201ENST00000357783 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.5■□□□□ 0.07
PHTF1-201ENST00000357783 SPANXN4Q5MJ08 99 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 TMTC4Q5T4D3 741 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 SPRED1Q7Z699 444 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 CYGBQ8WWM9 190 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 VPS50Q96JG6 964 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 CHID1Q9BWS9 393 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 BBS2Q9BXC9 721 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.5■□□□□ 0.07
PHTF1-201ENST00000357783 TMPRSS11EQ9UL52 423 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 PTPRSQ13332 1948 aa15.5■□□□□ 0.07
PHTF1-201ENST00000357783 KRT87PA6NCN2 255 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 WDR47O94967 919 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 RASAL1O95294 804 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 CLDN9O95484 217 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 POP4O95707 220 aaKnown RBP15.49■□□□□ 0.07
PHTF1-201ENST00000357783 LDLRP01130 860 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 ADH1AP07327 375 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 OR56A5P0C7T3 313 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 EPORP19235 508 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 SPINT3P49223 89 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 RPS6KA3P51812 740 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 FXNQ16595 210 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 PYCR3Q53H96 274 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 CACHD1Q5VU97 1274 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 SUSD1Q6UWL2 747 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 TRIM46Q7Z4K8 759 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 PAPD5Q8NDF8 572 aaKnown RBP15.49■□□□□ 0.07
PHTF1-201ENST00000357783 ZFP28Q8NHY6 868 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 HAUS8Q9BT25 410 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 BEGAINQ9BUH8 593 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 PPIL1Q9Y3C6 166 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 MYO7AQ13402 2215 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 PABPC1P11940 636 aaKnown RBP15.49■□□□□ 0.07
PHTF1-201ENST00000357783 NFKBIAP25963 317 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 MERTKQ12866 999 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 MAD2L1Q13257 205 aaPredicted RBP15.49■□□□□ 0.07
PHTF1-201ENST00000357783 MAPKAPK3Q16644 382 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 PRR23BQ6ZRT6 265 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 VRK3Q8IV63 474 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 TRIML2Q8N7C3 387 aa15.49■□□□□ 0.07
PHTF1-201ENST00000357783 KLHL23Q8NBE8 558 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms