RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 ACSBG2Q5FVE4 666 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 PIGZQ86VD9 579 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 LRRC52Q8N7C0 313 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 P2RY11Q96G91 374 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 FAM163AQ96GL9 167 aaPredicted RBP12.65□□□□□ -0.38
SMC4-202ENST00000357388 ART5Q96L15 291 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 LRRC3Q9BY71 257 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 PCDH18Q9HCL0 1135 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 SPIN1Q9Y657 262 aaPredicted RBP12.65□□□□□ -0.38
SMC4-202ENST00000357388 CDC42BPBQ9Y5S2 1711 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 CLDN4O14493 209 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 RORAP35398 523 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 PTPN9P43378 593 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 TAS2R40P59535 323 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 PRR5P85299 388 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 NRG1Q02297 640 aaPredicted RBP12.65□□□□□ -0.38
SMC4-202ENST00000357388 ZNF181Q2M3W8 571 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 DACT2Q5SW24 774 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 AADACL4Q5VUY2 407 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 GPR142Q7Z601 462 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 CENPSQ8N2Z9 138 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 SPATA6LQ8N4H0 392 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 C1orf216Q8TAB5 229 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 CPS1P31327 1500 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 A0A1W2PRQ8 180 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 SLC19A2O60779 497 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 CLDN11O75508 207 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 LHCGRP22888 699 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 S100PP25815 95 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 AQP1P29972 269 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 ARL3P36405 182 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 PIK3CBP42338 1070 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 SLC1A2P43004 574 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 C2orf80Q0P641 193 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 PPIGQ13427 754 aaKnown RBP eCLIP12.65□□□□□ -0.392e-7■■■■■ 57.4
SMC4-202ENST00000357388 XKR4Q5GH76 650 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 GALNT7Q86SF2 657 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 GHDCQ8N2G8 530 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 UBE2J2Q8N2K1 259 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 STON2Q8WXE9 905 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 ZBTB45Q96K62 511 aaPredicted RBP12.65□□□□□ -0.39
SMC4-202ENST00000357388 FUZQ9BT04 418 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 PREBQ9HCU5 417 aa12.65□□□□□ -0.39
SMC4-202ENST00000357388 DISP2A7MBM2 1401 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 LRRC72A6NJI9 287 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 IFNA2P01563 188 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 SRPRAP08240 638 aaKnown RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 BNIP3Q12983 259 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 POM121L1PQ3SYA9 428 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 STYXQ8WUJ0 223 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 XAGE5Q8WWM1 108 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 NCSTNQ92542 709 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 DNASE1L2Q92874 299 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 TRIM43Q96BQ3 446 aaPredicted RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 PWWP2AQ96N64 755 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 MRIQ9BWK5 157 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 ZNF700Q9H0M5 742 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 IMP3Q9NV31 184 aaKnown RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 DERAQ9Y315 318 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 PDPK1O15530 556 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 HLA-DPB1P04440 258 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 ANXA4P09525 319 aaPredicted RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 VARSP26640 1264 aaKnown RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 PON3Q15166 354 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 NCEH1Q6PIU2 408 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 ILDR1Q86SU0 546 aaPredicted RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 FAM124AQ86V42 546 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 RAVER1Q8IY67 606 aaKnown RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 KIAA0319LQ8IZA0 1049 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 FEM1CQ96JP0 617 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 RIPOR3Q96MK2 946 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 MAPKAP1Q9BPZ7 522 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 FAM124BQ9H5Z6 455 aaPredicted RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 NR2E1Q9Y466 385 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 HSPB11Q9Y547 144 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 PCDHGB5Q9Y5G0 923 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 PRNPP04156 253 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 MTHFD1P11586 935 aaKnown RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 ZNF823P16415 610 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 PRKCDQ05655 676 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 CACNG1Q06432 222 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 TARBP2Q15633 366 aaKnown RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 BTBD16Q32M84 506 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 ANKFN1Q8N957 763 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 PPP1R13LQ8WUF5 828 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 C10orf82Q8WW14 230 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 SLC13A3Q8WWT9 602 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 SMG7Q92540 1137 aaKnown RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 GTPBP3Q969Y2 492 aaKnown RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 MYO19Q96H55 970 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 PSKH2Q96QS6 385 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 C1orf21Q9H246 121 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 MMP27Q9H306 513 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 USP29Q9HBJ7 922 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 HCN3Q9P1Z3 774 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 ABCD2Q9UBJ2 740 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 TESMINQ9Y4I5 508 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 MAGED1Q9Y5V3 778 aaPredicted RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 KLRC4O43908 158 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 ITGB1P05556 798 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms