RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 POLR3HQ9Y535 204 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 PDZK1P1A8MUH7 402 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 E5RI56 91 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 H3BUI4 141 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 GPR39O43194 453 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR1I1O60431 355 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 NIPSNAP2O75323 286 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 SOAT2O75908 522 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 KCNK2O95069 426 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 MYCP01106 439 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 FTH1P02794 183 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 ALPLP05186 524 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 JUNBP17275 347 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 PSMB9P28065 219 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 HTR1BP28222 390 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR1E1P30953 314 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 ARPP19P56211 112 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 POU6F2P78424 691 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZNF33AQ06730 810 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 KCNAB2Q13303 367 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 AQP6Q13520 282 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 SIM2Q14190 667 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 C18orf21Q32NC0 220 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 C6orf136Q5SQH8 315 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 GTF2IRD2BQ6EKJ0 949 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 OVOS1Q6IE37 1185 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 LIMS2Q7Z4I7 341 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 ADCK1Q86TW2 530 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 GTF2IRD2Q86UP8 949 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 LACC1Q8IV20 430 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 HID1Q8IV36 788 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 CFAP52Q8N1V2 620 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 SIDT2Q8NBJ9 832 aaKnown RBP8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR7A2PQ8NGA2 310 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR4K2Q8NGD2 314 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 CLHC1Q8NHS4 586 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 PROKR1Q8TCW9 393 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 FRS2Q8WU20 508 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 SLC22A17Q8WUG5 538 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 PIK3R3Q92569 461 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 TINF2Q9BSI4 451 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 NARFLQ9H6Q4 476 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 NTN4Q9HB63 628 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 AIG1Q9NVV5 245 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 COMMD8Q9NX08 183 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 ST3GAL5Q9UNP4 418 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 C12orf71A8MTZ7 269 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 M0QZ92 97 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 DFNA5O60443 496 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 EPN2O95208 641 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 ANXA6P08133 673 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 RAP2AP10114 183 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 UMPSP11172 480 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 DBTP11182 482 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 ODC1P11926 461 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 ITGB6P18564 788 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 CFL1P23528 166 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 CD40LGP29965 261 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 CYP2C18P33260 490 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 ACVRL1P37023 503 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 GPR15P49685 360 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 SEPHS1P49903 392 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 HTR6P50406 440 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 PPP5CP53041 499 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 VBP1P61758 197 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 GPLD1P80108 840 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 CD47Q08722 323 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 PTGR1Q14914 329 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 PTPRRQ15256 657 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 DGUOKQ16854 277 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 BRMS1LQ5PSV4 323 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 TMEM236Q5W0B7 351 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 SULT1C3Q6IMI6 304 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 GCNT7Q6ZNI0 430 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 GPRIN3Q6ZVF9 776 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 TLK2Q86UE8 772 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 TCAIMQ8N3R3 496 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 LINC00469Q8N7U9 141 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR2T12Q8NG77 320 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 METTL2AQ96IZ6 378 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 PPP1R2P1Q96PQ5 205 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 ABHD16BQ9H3Z7 469 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 FAM118AQ9NWS6 357 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 LTBP3Q9NS15 1303 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 MYO1GB0I1T2 1018 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 PDHXO00330 501 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 RAMP2O60895 175 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 KERAO60938 352 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 EEDO75530 441 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 PRKD3O94806 890 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 ITGB1P05556 798 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 MMP2P08253 660 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 SLC2A4P14672 509 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 WEE1P30291 646 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 FMO3P31513 532 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 MLLT6P55198 1093 aaPredicted RBP8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 EEFSECP57772 596 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 ERVK-8P63133 956 aa8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 TIAL1Q01085 375 aaKnown RBP eCLIP8.09□□□□□ -1.11
CDC42SE1-201ENST00000357235 SLC14A2Q15849 920 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms