RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 TAF12Q16514 161 aa13.11□□□□□ -0.31
NCDN-201ENST00000356090 PARP15Q460N3 678 aa13.11□□□□□ -0.31
NCDN-201ENST00000356090 FAM171A1Q5VUB5 890 aa13.11□□□□□ -0.31
NCDN-201ENST00000356090 GLB1LQ6UWU2 654 aa13.11□□□□□ -0.31
NCDN-201ENST00000356090 ZNF467Q7Z7K2 595 aaPredicted RBP13.11□□□□□ -0.31
NCDN-201ENST00000356090 ZDHHC21Q8IVQ6 265 aa13.11□□□□□ -0.31
NCDN-201ENST00000356090 POC5Q8NA72 575 aa13.11□□□□□ -0.31
NCDN-201ENST00000356090 PDPRQ8NCN5 879 aa13.11□□□□□ -0.31
NCDN-201ENST00000356090 ZHX1-C8orf76Q96EF9 292 aa13.11□□□□□ -0.31
NCDN-201ENST00000356090 ALPK1Q96QP1 1244 aa13.11□□□□□ -0.31
NCDN-201ENST00000356090 SMPD4Q9NXE4 827 aa13.11□□□□□ -0.31
NCDN-201ENST00000356090 UPK1AO00322 258 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 TNFRSF10BO14763 440 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 AXIN1O15169 862 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 RAD51BO15315 384 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 FFAR2O15552 330 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 CREG1O75629 220 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 MYO1DO94832 1006 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 INHBBP09529 407 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 ALPIP09923 528 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 S100A3P33764 101 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 GRSF1Q12849 480 aaKnown RBP eCLIP13.1□□□□□ -0.31
NCDN-201ENST00000356090 PON2Q15165 354 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 ZCCHC8Q6NZY4 707 aaKnown RBP13.1□□□□□ -0.31
NCDN-201ENST00000356090 P3H2Q8IVL5 708 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 SCML4Q8N228 414 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 CD200R1Q8TD46 325 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 NETO1Q8TDF5 533 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 TSPEARQ8WU66 669 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 UBE2FQ969M7 185 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 WDR12Q9GZL7 423 aaKnown RBP13.1□□□□□ -0.31
NCDN-201ENST00000356090 SLC52A3Q9NQ40 469 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 TLR9Q9NR96 1032 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 MED16Q9Y2X0 877 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 PCDHB5Q9Y5E4 795 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 GPC6Q9Y625 555 aaPredicted RBP13.1□□□□□ -0.31
NCDN-201ENST00000356090 A0A0G2JMZ2 1700 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 LRRC37A2A6NM11 1700 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 NT5C1B-RDH14C9J2C7 533 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 PRMT5O14744 637 aaPredicted RBP13.1□□□□□ -0.31
NCDN-201ENST00000356090 INSIG1O15503 277 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 PRAMEF11O60813 436 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 RECQL5O94762 991 aaPredicted RBP13.1□□□□□ -0.31
NCDN-201ENST00000356090 XKR7Q5GH72 579 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 RIMKLAQ8IXN7 391 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 MCFD2Q8NI22 146 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 GTF3C2Q8WUA4 911 aaPredicted RBP13.1□□□□□ -0.31
NCDN-201ENST00000356090 PPP3R2Q96LZ3 170 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 MBOAT4Q96T53 435 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 OSBPL10Q9BXB5 764 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 BRINP2Q9C0B6 783 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 PRDM5Q9NQX1 630 aaPredicted RBP13.1□□□□□ -0.31
NCDN-201ENST00000356090 TLR8Q9NR97 1041 aaKnown RBP13.1□□□□□ -0.31
NCDN-201ENST00000356090 NLE1Q9NVX2 485 aaPredicted RBP13.1□□□□□ -0.31
NCDN-201ENST00000356090 PDP1Q9P0J1 537 aaPredicted RBP13.1□□□□□ -0.31
NCDN-201ENST00000356090 TMEM221A6NGB7 291 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 STX16O14662 325 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 HTR1AP08908 422 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 FAM163BP0C2L3 166 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 CASP9P55211 416 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 GP2P55259 537 aaKnown RBP13.1□□□□□ -0.31
NCDN-201ENST00000356090 ADAM17P78536 824 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 PURAQ00577 322 aaKnown RBP13.1□□□□□ -0.31
NCDN-201ENST00000356090 EPS8Q12929 822 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 TSTA3Q13630 321 aaPredicted RBP13.1□□□□□ -0.31
NCDN-201ENST00000356090 SETMARQ53H47 684 aaPredicted RBP13.1□□□□□ -0.31
NCDN-201ENST00000356090 COLEC12Q5KU26 742 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 C9orf131Q5VYM1 1079 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 CADM3Q8N126 398 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 CAPSLQ8WWF8 208 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 C1orf74Q96LT6 269 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 TDRD1Q9BXT4 1180 aaKnown RBP13.1□□□□□ -0.31
NCDN-201ENST00000356090 MARCH7Q9H992 704 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 LRTM1Q9HBL6 345 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 ENPP5Q9UJA9 477 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 TPRKBQ9Y3C4 175 aa13.1□□□□□ -0.31
NCDN-201ENST00000356090 MT-ND2P03891 347 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 GSTT2P0CG29 244 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 GSTT2BP0CG30 244 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 HOXD12P35452 270 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 GNPDA1P46926 289 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 ZFP36L2P47974 494 aaKnown RBP13.09□□□□□ -0.31
NCDN-201ENST00000356090 TRPC1P48995 793 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 DPY19L1Q2PZI1 675 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 AFMIDQ63HM1 303 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 ZNF621Q6ZSS3 439 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 HEATR4Q86WZ0 1026 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 KLHDC8BQ8IXV7 354 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 ZNF382Q96SR6 550 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 BARD1Q99728 777 aaKnown RBP13.09□□□□□ -0.31
NCDN-201ENST00000356090 ACTL8Q9H568 366 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 GPN2Q9H9Y4 310 aaPredicted RBP13.09□□□□□ -0.31
NCDN-201ENST00000356090 PAK1IP1Q9NWT1 392 aaPredicted RBP13.09□□□□□ -0.31
NCDN-201ENST00000356090 VPS9D1Q9Y2B5 631 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 WDR37Q9Y2I8 494 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 SAMHD1Q9Y3Z3 626 aaKnown RBP13.09□□□□□ -0.31
NCDN-201ENST00000356090 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.09□□□□□ -0.31
NCDN-201ENST00000356090 PER2O15055 1255 aa13.09□□□□□ -0.31
NCDN-201ENST00000356090 LSM1O15116 133 aaKnown RBP13.09□□□□□ -0.31
NCDN-201ENST00000356090 PGLSO95336 258 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms