RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 CERS2Q96G23 380 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 CABS1Q96KC9 395 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 PTCHD1Q96NR3 888 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 NUDCD1Q96RS6 583 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 FEM1AQ9BSK4 669 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 FAM167BQ9BTA0 163 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 CINPQ9BW66 212 aaPredicted RBP6.89□□□□□ -1.31
VPS13A-201ENST00000355766 CENPHQ9H3R5 247 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 PLAC1Q9HBJ0 212 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 PRSS16Q9NQE7 514 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 NKIRAS1Q9NYS0 192 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 HACD3Q9P035 362 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 SERGEFQ9UGK8 458 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 CORO1CQ9ULV4 474 aaPredicted RBP6.89□□□□□ -1.31
VPS13A-201ENST00000355766 SCML1Q9UN30 329 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 HS3ST2Q9Y278 367 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 NCKAP1Q9Y2A7 1128 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 TCAF1Q9Y4C2 921 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 RPS6KL1Q9Y6S9 549 aa6.89□□□□□ -1.31
VPS13A-201ENST00000355766 PLXNA2O75051 1894 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 A0A0D9SEW6 157 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.88□□□□□ -1.31
VPS13A-201ENST00000355766 TLDC2A0PJX2 215 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 CCDC189A1A4V9 331 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 CLEC18AA5D8T8 446 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 LRRC72A6NJI9 287 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 J3KR12 359 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 TLR4O00206 839 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 TRIM38O00635 465 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 INSIG1O15503 277 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 SLC7A4O43246 635 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 TBL1XO60907 577 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 SDC3O75056 442 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 AVILO75366 819 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 NDST3O95803 873 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 MMP2P08253 660 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 CELA3BP08861 270 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 MYF5P13349 255 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 BRAFP15056 766 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 ITGB6P18564 788 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 MGAT1P26572 445 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 HPDP32754 393 aaPredicted RBP6.88□□□□□ -1.31
VPS13A-201ENST00000355766 LSP1P33241 339 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 MAGEA12P43365 314 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 SLCO1A2P46721 670 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 SERPINH1P50454 418 aaKnown RBP6.88□□□□□ -1.31
VPS13A-201ENST00000355766 CCR5P51681 352 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 KRTAP10-2P60368 255 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 TLE1Q04724 770 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 SLC18A2Q05940 514 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 SLC1A5Q15758 541 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 ANKRD20A4Q4UJ75 823 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 C3orf38Q5JPI3 329 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 GRTP1Q5TC63 336 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 DENND5AQ6IQ26 1287 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 RFWD3Q6PCD5 774 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 CLEC18BQ6UXF7 455 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 SPATS2Q86XZ4 545 aaKnown RBP6.88□□□□□ -1.31
VPS13A-201ENST00000355766 MPP5Q8N3R9 675 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 SH2D3CQ8N5H7 860 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 KDM1BQ8NB78 822 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 CLEC18CQ8NCF0 446 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 IPMKQ8NFU5 416 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 OR52K1Q8NGK4 314 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 OR2T34Q8NGX1 318 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 RAB3IL1Q8TBN0 382 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 ALG14Q96F25 216 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 SERAC1Q96JX3 654 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 TUBGCP5Q96RT8 1024 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 TRIB3Q96RU7 358 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 TDRD1Q9BXT4 1180 aaKnown RBP6.88□□□□□ -1.31
VPS13A-201ENST00000355766 ADGRE3Q9BY15 652 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 RSPH9Q9H1X1 276 aaPredicted RBP6.88□□□□□ -1.31
VPS13A-201ENST00000355766 TRABDQ9H4I3 376 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 NT5MQ9NPB1 228 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 TREX1Q9NSU2 369 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 ABCB8Q9NUT2 735 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 SYBUQ9NX95 663 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.88□□□□□ -1.31
VPS13A-201ENST00000355766 TXNDC16Q9P2K2 825 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 VPS28Q9UK41 221 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 FZD4Q9ULV1 537 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 SATB2Q9UPW6 733 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 SF3B6Q9Y3B4 125 aaKnown RBP6.88□□□□□ -1.31
VPS13A-201ENST00000355766 CABIN1Q9Y6J0 2220 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 RELNP78509 3460 aa6.88□□□□□ -1.31
VPS13A-201ENST00000355766 GOLGA6L7A0A1B0GV03 622 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 A0A1W2PNU3 283 aaPredicted RBP6.87□□□□□ -1.31
VPS13A-201ENST00000355766 TMEM120BA0PK00 339 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 MROH6A6NGR9 719 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 ENO4A6NNW6 628 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 CDRT15L2A8MXV6 281 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 TYROBPO43914 113 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 CRTAMO95727 393 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 FAM107AO95990 144 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 GSRP00390 522 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 IL1BP01584 269 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 ASLP04424 464 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 GP1BAP07359 652 aa6.87□□□□□ -1.31
VPS13A-201ENST00000355766 CD3EP07766 207 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms