RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 DENRO43583 198 aaKnown RBP12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 DNASE1L1P49184 302 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZNF132P52740 706 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 CAMK1Q14012 370 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 COL9A3Q14050 684 aaPredicted RBP12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 FAM76BQ5HYJ3 339 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 OR10H4Q8NGA5 316 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 MRPL9Q9BYD2 267 aaKnown RBP12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 B3GNT5Q9BYG0 378 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 RANBP3Q9H6Z4 567 aaPredicted RBP12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 EIF2B4Q9UI10 523 aaKnown RBP12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 PHF24Q9UPV7 400 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 H3BNH8 94 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 XPNPEP2O43895 674 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 ECHS1P30084 290 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 GLUD2P49448 558 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 RPA4Q13156 261 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 FBXL20Q96IG2 436 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 ADAMTS10Q9H324 1103 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 RUVBL1Q9Y265 456 aaKnown RBP12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 NID2Q14112 1375 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 FXYD6-FXYD2A0A087WZ82 144 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 DAPL1A0PJW8 107 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 MATN3O15232 486 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 HEPACAMQ14CZ8 416 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 HAGHLQ6PII5 290 aaPredicted RBP12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 TIFABQ6ZNK6 161 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 TMPRSS11BQ86T26 416 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 CPNE9Q8IYJ1 553 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 CXorf40AQ8TE69 158 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 MAPKAP1Q9BPZ7 522 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 FXYD6Q9H0Q3 95 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 MARK1Q9P0L2 795 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 PCDHGB6Q9Y5F9 930 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 C2CD4BA6NLJ0 364 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 K7EPI3 171 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 DLDP09622 509 aaKnown RBP12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 ACADMP11310 421 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 HUNKP57058 714 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 PDE12Q6L8Q7 609 aaKnown RBP12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 MSANTD1Q6ZTZ1 278 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 MARCH9Q86YJ5 346 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 RELL1Q8IUW5 271 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 EXOC2Q96KP1 924 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 AMBNQ9NP70 447 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 PCDHGB7Q9Y5F8 929 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 ARHGAP23Q9P227 1491 aa12.51□□□□□ -0.41
SYNCRIP-201ENST00000355238 A0A0J9YVX5 310 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 TLR4O00206 839 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 PPEF2O14830 753 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 PMM2O15305 246 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 PDPK1O15530 556 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 NPPAP01160 153 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 FPR1P21462 350 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 RPIAP49247 311 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 XKP51811 444 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 TXNL4AP83876 142 aaKnown RBP12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 TARDBPQ13148 414 aaKnown RBP eCLIP12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 KLF1Q13351 362 aaPredicted RBP12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZNF460Q14592 562 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 RAET1GQ6H3X3 334 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 ANKRD13BQ86YJ7 626 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 OR4C6Q8NH72 309 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 STOML3Q8TAV4 291 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 GPER1Q99527 375 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 AKTIPQ9H8T0 292 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 TMLHEQ9NVH6 421 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 C14orf105Q9NVL8 296 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 PCDHGB1Q9Y5G3 927 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 GLYATL1P3A0A0U1RQE8 302 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 GNAO1P09471 354 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 MYCLP1P12525 358 aaPredicted RBP12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 FKBP1AP62942 108 aaKnown RBP12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 IRF9Q00978 393 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 PHTF2Q8N3S3 785 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 MSANTD3Q96H12 275 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 DPP7Q9UHL4 492 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 SPATA31A1Q5TZJ5 1347 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 IL7RP16871 459 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 GNAZP19086 355 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 VARSP26640 1264 aaKnown RBP12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 PDHA2P29803 388 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 TSPAN5P62079 268 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 DSC3Q14574 896 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 MPPE1Q53F39 396 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 MED27Q6P2C8 311 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 MON1AQ86VX9 555 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 LGI4Q8N135 537 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 KCNC2Q96PR1 638 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 IKZF4Q9H2S9 585 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 NDOR1Q9UHB4 597 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 MST1RQ04912 1400 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZNF536O15090 1300 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 SPATA31A6Q5VVP1 1343 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 C5orf51A6NDU8 294 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 CLDN5O00501 218 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 XKRYO14609 159 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 GABRDO14764 452 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 TBL1XO60907 577 aa12.5□□□□□ -0.41
SYNCRIP-201ENST00000355238 C22orf31O95567 290 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms