RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 OR56A3Q8NH54 315 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 HIST1H2AHQ96KK5 128 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 HIST1H2AJQ99878 128 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 EGFL8Q99944 293 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 H2AFJQ9BTM1 129 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 RNPEPL1Q9HAU8 725 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 A0A1W2PQF6 199 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 DYTNA2CJ06 578 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 TMEM202A6NGA9 273 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 CD1EP15812 388 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 ZFP36L2P47974 494 aaKnown RBP16.81■□□□□ 0.28
VPS13B-201ENST00000355155 SLC25A3Q00325 362 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 DMPKQ09013 629 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 SMAD4Q13485 552 aaKnown RBP16.81■□□□□ 0.28
VPS13B-201ENST00000355155 CUL3Q13618 768 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 RAET1GQ6H3X3 334 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 DSELQ8IZU8 1212 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 TMEM159Q96B96 161 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 PREBQ9HCU5 417 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 ARL15Q9NXU5 204 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 ZFC3H1O60293 1989 aaKnown RBP16.81■□□□□ 0.28
VPS13B-201ENST00000355155 ARHGEF33A8MVX0 844 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 PLK4O00444 970 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 LSM1O15116 133 aaKnown RBP16.8■□□□□ 0.28
VPS13B-201ENST00000355155 ADAM23O75077 832 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 CRCPO75575 148 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 CAPN1P07384 714 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 ACADLP28330 430 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 CASP2P42575 452 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 SOX9P48436 509 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 GTF2H3Q13889 308 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 ZNF648Q5T619 568 aaPredicted RBP16.8■□□□□ 0.28
VPS13B-201ENST00000355155 UNC5DQ6UXZ4 953 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 CHPFQ8IZ52 775 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 MIER2Q8N344 545 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 FBXW8Q8N3Y1 598 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 IL17RCQ8NAC3 791 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 ESAMQ96AP7 390 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 ROPN1LQ96C74 230 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 GPRC5BQ9NZH0 403 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 FIS1Q9Y3D6 152 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 TIMM22Q9Y584 194 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 MGAT4DA6NG13 374 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 PRR19A6NJB7 356 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 FBP2O00757 339 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 SYNCRIPO60506 623 aaKnown RBP16.8■□□□□ 0.28
VPS13B-201ENST00000355155 LINC00032P0C843 101 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 PFN3P60673 137 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 STX1BP61266 288 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 ZRSR2Q15696 482 aaKnown RBP16.8■□□□□ 0.28
VPS13B-201ENST00000355155 AAK1Q2M2I8 961 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.8■□□□□ 0.28
VPS13B-201ENST00000355155 PLCD3Q8N3E9 789 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 ST13P5Q8NFI4 369 aaPredicted RBP16.8■□□□□ 0.28
VPS13B-201ENST00000355155 FCRL1Q96LA6 429 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 DCLRE1BQ9H816 532 aa16.8■□□□□ 0.28
VPS13B-201ENST00000355155 ZFR2Q9UPR6 939 aaKnown RBP16.8■□□□□ 0.28
VPS13B-201ENST00000355155 OR2AG2A6NM03 316 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 MEI4A8MW99 385 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 CLDN9O95484 217 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 GUCA1CO95843 209 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 CATP04040 527 aaKnown RBP16.79■□□□□ 0.28
VPS13B-201ENST00000355155 WSCD2Q2TBF2 565 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 C6orf136Q5SQH8 315 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 LIPJQ5W064 366 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 MYLK4Q86YV6 388 aaPredicted RBP16.79■□□□□ 0.28
VPS13B-201ENST00000355155 BEND7Q8N7W2 519 aaPredicted RBP16.79■□□□□ 0.28
VPS13B-201ENST00000355155 METTL6Q8TCB7 284 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 WDR34Q96EX3 536 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 SCARF2Q96GP6 870 aaPredicted RBP16.79■□□□□ 0.28
VPS13B-201ENST00000355155 PPP3R2Q96LZ3 170 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 THTPAQ9BU02 230 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 RMI1Q9H9A7 625 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 DNAJC11Q9NVH1 559 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 SHISA7A6NL88 538 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 IFRD1O00458 451 aaPredicted RBP16.79■□□□□ 0.28
VPS13B-201ENST00000355155 KCNJ13O60928 360 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 ZNF8P17098 575 aaPredicted RBP16.79■□□□□ 0.28
VPS13B-201ENST00000355155 CDK3Q00526 305 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 FBXO48Q5FWF7 155 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 PIGGQ5H8A4 983 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 AAGABQ6PD74 315 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 DDIASQ8IXT1 998 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 SFRP1Q8N474 314 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 HDDC3Q8N4P3 179 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 CDYL2Q8N8U2 506 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 TUBGCP3Q96CW5 907 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 RCN3Q96D15 328 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 METTL2AQ96IZ6 378 aaKnown RBP16.79■□□□□ 0.28
VPS13B-201ENST00000355155 NDUFAF1Q9Y375 327 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 PTGDR2Q9Y5Y4 395 aa16.79■□□□□ 0.28
VPS13B-201ENST00000355155 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.79■□□□□ 0.28
VPS13B-201ENST00000355155 C1orf105O95561 183 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 EGFP01133 1207 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 RPS21P63220 83 aaKnown RBP16.78■□□□□ 0.28
VPS13B-201ENST00000355155 FOXM1Q08050 763 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 FBXO43Q4G163 708 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 SYTL3Q4VX76 610 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 REP15Q6BDI9 236 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 SDE2Q6IQ49 451 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms