RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 RPS9P46781 194 aaKnown RBP13□□□□□ -0.33
SCN8A-202ENST00000355133 NCBP2P52298 156 aaKnown RBP eCLIP13□□□□□ -0.33
SCN8A-202ENST00000355133 ZNF280AP59817 542 aaPredicted RBP13□□□□□ -0.33
SCN8A-202ENST00000355133 LRRC32Q14392 662 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 ZCCHC12Q6PEW1 402 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 GHDCQ8N2G8 530 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 TSTD1Q8NFU3 115 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 FUBP3Q96I24 572 aaKnown RBP eCLIP13□□□□□ -0.33
SCN8A-202ENST00000355133 RIOK2Q9BVS4 552 aaKnown RBP13□□□□□ -0.33
SCN8A-202ENST00000355133 WNT9AO14904 365 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 IRAK2O43187 625 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 ARHGDIBP52566 201 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 MTPNP58546 118 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 ZNF366Q8N895 744 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 WDR26Q9H7D7 661 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 PNO1Q9NRX1 252 aaKnown RBP13□□□□□ -0.33
SCN8A-202ENST00000355133 YIPF1Q9Y548 306 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 HLA-DQB2P05538 268 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 NR4A1P22736 598 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 RALGPS1Q5JS13 557 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 TPGS2Q68CL5 300 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 MPP5Q8N3R9 675 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 PYCR2Q96C36 320 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 HAPLN3Q96S86 360 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 OR51V1Q9H2C8 321 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 SUV39H2Q9H5I1 410 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 BCAS3Q9H6U6 928 aa13□□□□□ -0.33
SCN8A-202ENST00000355133 WBP11Q9Y2W2 641 aaKnown RBP13□□□□□ -0.33
SCN8A-202ENST00000355133 PI15O43692 258 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 KHKP50053 298 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 GDPD4Q6W3E5 623 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 FAM92BQ6ZTR7 304 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 CPNE8Q86YQ8 564 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 FITM2Q8N6M3 262 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 RASSF5Q8WWW0 418 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 BRI3BPQ8WY22 251 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 ZNF516Q92618 1163 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 DPYSL5Q9BPU6 564 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 RNF39Q9H2S5 420 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 EIF2B3Q9NR50 452 aaKnown RBP12.99□□□□□ -0.33
SCN8A-202ENST00000355133 ABI3Q9P2A4 366 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 MED31Q9Y3C7 131 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 ZNF536O15090 1300 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 A8MUA0 341 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 ADAMDEC1O15204 470 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 NPHS1O60500 1241 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 FSHRP23945 695 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 CCKBRP32239 447 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 CCNFP41002 786 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 BLKP51451 505 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 CBX3Q13185 183 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 METTL21CQ5VZV1 264 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 MBLAC2Q68D91 279 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 OR2L5Q8NG80 312 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 HM13Q8TCT9 377 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 HTRA1Q92743 480 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 TMLHEQ9NVH6 421 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 RUVBL1Q9Y265 456 aaKnown RBP12.99□□□□□ -0.33
SCN8A-202ENST00000355133 NR2E1Q9Y466 385 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 ARVCFO00192 962 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 CLCN7P51798 805 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 MXD1Q05195 221 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 SMU1Q2TAY7 513 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 WFIKKN2Q8TEU8 576 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 DIRAS2Q96HU8 199 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 CHCHD6Q9BRQ6 235 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 YIPF4Q9BSR8 244 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 DMAC2Q9NW81 257 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 TMA7Q9Y2S6 64 aaKnown RBP12.99□□□□□ -0.33
SCN8A-202ENST00000355133 KIF1AQ12756 1690 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 CPED1A4D0V7 1026 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 PLK4O00444 970 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 UNGP13051 313 aaPredicted RBP12.99□□□□□ -0.33
SCN8A-202ENST00000355133 SDC2P34741 201 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 GRK6P43250 576 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 ARHGAP1Q07960 439 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 C5orf22Q49AR2 442 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 TXNDC8Q6A555 127 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 KIAA0930Q6ICG6 404 aaPredicted RBP12.99□□□□□ -0.33
SCN8A-202ENST00000355133 OR4C6Q8NH72 309 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 DUSP26Q9BV47 211 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 CHMP1AQ9HD42 196 aaPredicted RBP12.99□□□□□ -0.33
SCN8A-202ENST00000355133 SIX2Q9NPC8 291 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 ADAP2Q9NPF8 381 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 MRC1P22897 1456 aa12.99□□□□□ -0.33
SCN8A-202ENST00000355133 GABRDO14764 452 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 NIPSNAP2O75323 286 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 TRIM3O75382 744 aaPredicted RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 GADD45GO95257 159 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 PSMA1P25786 263 aaKnown RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 BCAP31P51572 246 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 RAB25P57735 213 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 RFTN1Q14699 578 aaPredicted RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 DPYSL2Q16555 572 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 PRR23BQ6ZRT6 265 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 SETD6Q8TBK2 473 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 SLC13A3Q8WWT9 602 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 TRMT61BQ9BVS5 477 aaKnown RBP12.98□□□□□ -0.33
SCN8A-202ENST00000355133 IFT27Q9BW83 186 aa12.98□□□□□ -0.33
SCN8A-202ENST00000355133 AOC2O75106 756 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms