RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 ATPIF1Q9UII2 106 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 WBP11Q9Y2W2 641 aaKnown RBP9.22□□□□□ -0.93
SMG6-202ENST00000354901 SNX8Q9Y5X2 465 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 LAMA2P24043 3122 aaKnown RBP9.21□□□□□ -0.93
SMG6-202ENST00000354901 FAM155AB1AL88 458 aaPredicted RBP9.21□□□□□ -0.93
SMG6-202ENST00000354901 GNGT2O14610 69 aa9.21□□□□□ -0.93
SMG6-202ENST00000354901 ANGPT2O15123 496 aa9.21□□□□□ -0.93
SMG6-202ENST00000354901 CD3EAPO15446 510 aaKnown RBP9.21□□□□□ -0.93
SMG6-202ENST00000354901 TNFRSF21O75509 655 aa9.21□□□□□ -0.93
SMG6-202ENST00000354901 ARHGEF15O94989 841 aa9.21□□□□□ -0.93
SMG6-202ENST00000354901 DIO3P55073 304 aa9.21□□□□□ -0.93
SMG6-202ENST00000354901 IL5RAQ01344 420 aa9.21□□□□□ -0.93
SMG6-202ENST00000354901 TRIM48Q8IWZ4 208 aa9.21□□□□□ -0.93
SMG6-202ENST00000354901 C8orf59Q8N0T1 100 aaPredicted RBP9.21□□□□□ -0.93
SMG6-202ENST00000354901 FAM109AQ8N4B1 249 aa9.21□□□□□ -0.93
SMG6-202ENST00000354901 FBXO32Q969P5 355 aa9.21□□□□□ -0.93
SMG6-202ENST00000354901 PKMYT1Q99640 499 aa9.21□□□□□ -0.93
SMG6-202ENST00000354901 TRIM62Q9BVG3 475 aa9.21□□□□□ -0.93
SMG6-202ENST00000354901 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.21□□□□□ -0.93
SMG6-202ENST00000354901 CLPBQ9H078 707 aa9.21□□□□□ -0.93
SMG6-202ENST00000354901 GPN2Q9H9Y4 310 aaPredicted RBP9.21□□□□□ -0.93
SMG6-202ENST00000354901 DNMT3LQ9UJW3 386 aa9.21□□□□□ -0.93
SMG6-202ENST00000354901 USP22Q9UPT9 525 aa9.21□□□□□ -0.93
SMG6-202ENST00000354901 DNMT3AQ9Y6K1 912 aaPredicted RBP9.21□□□□□ -0.93
SMG6-202ENST00000354901 A0A0D9SEW6 157 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 C16orf96A6NNT2 1141 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 EVPLLA8MZ36 301 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 NME4O00746 187 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 ENPP3O14638 875 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 LDB2O43679 373 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 RHOBTB1O94844 696 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 BMP2P12643 396 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 CAPN3P20807 821 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 HOXC13P31276 330 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 LAPTM5Q13571 262 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 ZMYND11Q15326 602 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 LARP4Q71RC2 724 aaKnown RBP eCLIP9.21□□□□□ -0.94
SMG6-202ENST00000354901 OR6Q1Q8NGQ2 317 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 TP53INP1Q96A56 240 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 CLSTN3Q9BQT9 956 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 MARCH2Q9P0N8 246 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 PDE10AQ9Y233 779 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 A0A0U1RQF3 1178 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 TCRBV3S1A0A5B6 114 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 H0Y626 953 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 H0YJX3 145 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 TRIM24O15164 1050 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 SLC7A4O43246 635 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 DUSP11O75319 330 aaKnown RBP9.21□□□□□ -0.94
SMG6-202ENST00000354901 UPK1BO75841 260 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 PGLSO95336 258 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 PRDX3P30048 256 aaKnown RBP9.21□□□□□ -0.94
SMG6-202ENST00000354901 FMO3P31513 532 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 PBX3P40426 434 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 CDKN1CP49918 316 aaPredicted RBP9.21□□□□□ -0.94
SMG6-202ENST00000354901 AGTR2P50052 363 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 ALDH6A1Q02252 535 aaKnown RBP9.21□□□□□ -0.94
SMG6-202ENST00000354901 EIF4EBP2Q13542 120 aaPredicted RBP9.21□□□□□ -0.94
SMG6-202ENST00000354901 HIST2H2ACQ16777 129 aaPredicted RBP9.21□□□□□ -0.94
SMG6-202ENST00000354901 PLA2G4EQ3MJ16 856 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 RABL3Q5HYI8 236 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 MFSD14CQ5VZR4 134 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 TXNDC11Q6PKC3 985 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 PAQR3Q6TCH7 311 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 SLC16A12Q6ZSM3 486 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 EFL1Q7Z2Z2 1120 aaKnown RBP9.21□□□□□ -0.94
SMG6-202ENST00000354901 ZNF438Q7Z4V0 828 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 RAB44Q7Z6P3 723 aaPredicted RBP9.21□□□□□ -0.94
SMG6-202ENST00000354901 MON1AQ86VX9 555 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 AMIGO1Q86WK6 493 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 CLYBLQ8N0X4 340 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 EFHBQ8N7U6 833 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 OR7D4Q8NG98 312 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 GTF2H4Q92759 462 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 SUSD3Q96L08 255 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 ACOX2Q99424 681 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 MRM3Q9HC36 420 aaKnown RBP9.21□□□□□ -0.94
SMG6-202ENST00000354901 CPNE5Q9HCH3 593 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 RANGRFQ9HD47 186 aaPredicted RBP9.21□□□□□ -0.94
SMG6-202ENST00000354901 MRPL40Q9NQ50 206 aaKnown RBP9.21□□□□□ -0.94
SMG6-202ENST00000354901 UBA2Q9UBT2 640 aaPredicted RBP9.21□□□□□ -0.94
SMG6-202ENST00000354901 INVSQ9Y283 1065 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 U3KQV3 271 aa9.21□□□□□ -0.94
SMG6-202ENST00000354901 CASP8AP2Q9UKL3 1982 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 A0A0X1KG70 313 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 I3L521 148 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 AZIN1O14977 448 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 NOS1APO75052 506 aaPredicted RBP9.2□□□□□ -0.94
SMG6-202ENST00000354901 CD1DP15813 335 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 RHOQP17081 205 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 HOXC8P31273 242 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 HERVK_113P63132 956 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 GRSF1Q12849 480 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMG6-202ENST00000354901 TAF10Q12962 218 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 TSNQ15631 228 aaKnown RBP9.2□□□□□ -0.94
SMG6-202ENST00000354901 ARTNQ5T4W7 220 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 GLRX5Q86SX6 157 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 SERINC5Q86VE9 423 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 P2RY8Q86VZ1 359 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 METTL4Q8N3J2 472 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms