RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 MUSKO15146 869 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 S100BP04271 92 aaPredicted RBP11.2□□□□□ -0.62
CAPN9-202ENST00000354537 GSNP06396 782 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 LPOP22079 712 aaPredicted RBP11.2□□□□□ -0.62
CAPN9-202ENST00000354537 HTR6P50406 440 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 ARHGDIAP52565 204 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 PHC1P78364 1004 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 IL5RAQ01344 420 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 TUSC3Q13454 348 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 GTF2H2Q13888 395 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 CLCA4Q14CN2 919 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 C5orf22Q49AR2 442 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 RFTN2Q52LD8 501 aaPredicted RBP11.2□□□□□ -0.62
CAPN9-202ENST00000354537 CTSL3PQ5NE16 218 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 CACHD1Q5VU97 1274 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 GTF2H2CQ6P1K8 395 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 GLT6D1Q7Z4J2 308 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 TRIM46Q7Z4K8 759 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 B3GNT8Q7Z7M8 397 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 TMEM179BQ7Z7N9 219 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 MSRB3Q8IXL7 192 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 CHPFQ8IZ52 775 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 FAM9CQ8IZT9 166 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 PGBD3Q8N328 593 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 OR4F6Q8NGB9 312 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 NDNFQ8TB73 568 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 FRS2Q8WU20 508 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 FCGR1BQ92637 280 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 DPY30Q9C005 99 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 SLIRPQ9GZT3 109 aaKnown RBP11.2□□□□□ -0.62
CAPN9-202ENST00000354537 MMP27Q9H306 513 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 CLMPQ9H6B4 373 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 SPC25Q9HBM1 224 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 C1orf109Q9NX04 203 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 ERVK-18Q9QC07 812 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 PCDHB8Q9UN66 801 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 TSC22D4Q9Y3Q8 395 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 SPO11Q9Y5K1 396 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 DOCK4Q8N1I0 1966 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 MN1Q10571 1320 aaPredicted RBP11.2□□□□□ -0.62
CAPN9-202ENST00000354537 H0Y626 953 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 RGS10O43665 173 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 TRIM16O95361 564 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 GLUD1P00367 558 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 IGLV3-27P01718 113 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 RPLP2P05387 115 aaKnown RBP11.2□□□□□ -0.62
CAPN9-202ENST00000354537 EFNA1P20827 205 aaPredicted RBP11.2□□□□□ -0.62
CAPN9-202ENST00000354537 IGFBP5P24593 272 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 SERPINB1P30740 379 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 GSSP48637 474 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 RING1Q06587 406 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 RAPSNQ13702 412 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 KCNJ8Q15842 424 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 CPZQ66K79 652 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 MILR1Q7Z6M3 343 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 HS3ST5Q8IZT8 346 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 SIDT2Q8NBJ9 832 aaKnown RBP11.2□□□□□ -0.62
CAPN9-202ENST00000354537 NPLOC4Q8TAT6 608 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 LPPQ93052 612 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 PSKH2Q96QS6 385 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 KLHL25Q9H0H3 589 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 MAGEH1Q9H213 219 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 KCNH6Q9H252 994 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 TM9SF3Q9HD45 589 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 SLC25A37Q9NYZ2 338 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 NUDT5Q9UKK9 219 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 DHRS7Q9Y394 339 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 ASB1Q9Y576 335 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 PLXNA3P51805 1871 aa11.2□□□□□ -0.62
CAPN9-202ENST00000354537 A0A096LPI6 279 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 WNT9AO14904 365 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 GPR182O15218 404 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 CA12O43570 354 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 MYO1DO94832 1006 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 SEC24AO95486 1093 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 PGRP06401 933 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 PRSS56P0CW18 603 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 SLC2A4P14672 509 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 OR1E1P30953 314 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 EIF2DP41214 584 aaKnown RBP11.19□□□□□ -0.62
CAPN9-202ENST00000354537 TRAF3Q13114 568 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 KRR1Q13601 381 aaKnown RBP11.19□□□□□ -0.62
CAPN9-202ENST00000354537 ABRAXAS2Q15018 415 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 FBXO48Q5FWF7 155 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 HABP4Q5JVS0 413 aaKnown RBP11.19□□□□□ -0.62
CAPN9-202ENST00000354537 KDM4DQ6B0I6 523 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 TSPYL5Q86VY4 417 aaPredicted RBP11.19□□□□□ -0.62
CAPN9-202ENST00000354537 PPP1R13LQ8WUF5 828 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 LGALS12Q96DT0 336 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 DSN1Q9H410 356 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 SAMD4AQ9UPU9 718 aaKnown RBP11.19□□□□□ -0.62
CAPN9-202ENST00000354537 PCDHB14Q9Y5E9 798 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 PCDHB1Q9Y5F3 818 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 RAD51BO15315 384 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 DPM1O60762 260 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 NIPSNAP2O75323 286 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 UPK1BO75841 260 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 ZBTB7AO95365 584 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 NR4A1P22736 598 aa11.19□□□□□ -0.62
CAPN9-202ENST00000354537 GNPDA1P46926 289 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms