RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 PRLP01236 227 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 CAPN1P07384 714 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 PIRTP0C851 137 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 CCDC166P0CW27 439 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 COX6B1P14854 86 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 ZFXP17010 805 aaPredicted RBP10.89□□□□□ -0.67
RTN3-204ENST00000354497 AGXTP21549 392 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 EEF1GP26641 437 aaKnown RBP10.89□□□□□ -0.67
RTN3-204ENST00000354497 PBLDP30039 288 aaPredicted RBP10.89□□□□□ -0.67
RTN3-204ENST00000354497 RORAP35398 523 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 RPL26P61254 145 aaKnown RBP10.89□□□□□ -0.67
RTN3-204ENST00000354497 PHEXP78562 749 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 IFT88Q13099 833 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 RPE65Q16518 533 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 HIF1AQ16665 826 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 CRB2Q5IJ48 1285 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 THEMIS2Q5TEJ8 643 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 MLIPQ5VWP3 458 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 WASH2PQ6VEQ5 465 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 Q6ZS92 163 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 POLNQ7Z5Q5 900 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 ZNF547Q8IVP9 402 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 IQCF2Q8IXL9 164 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 NXPE1Q8N323 547 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 TRAM1L1Q8N609 369 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 GRHL3Q8TE85 626 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 CNDP1Q96KN2 507 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 PPM1MQ96MI6 270 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 TRAPPC9Q96Q05 1148 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 WDR77Q9BQA1 342 aaPredicted RBP10.89□□□□□ -0.67
RTN3-204ENST00000354497 ZFYVE1Q9HBF4 777 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 LATS2Q9NRM7 1088 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 GPN3Q9UHW5 284 aaPredicted RBP10.89□□□□□ -0.67
RTN3-204ENST00000354497 NOVA2Q9UNW9 492 aaKnown RBP10.89□□□□□ -0.67
RTN3-204ENST00000354497 RPL26L1Q9UNX3 145 aaKnown RBP10.89□□□□□ -0.67
RTN3-204ENST00000354497 CSAG2Q9Y5P2 127 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 CFAP20Q9Y6A4 193 aaKnown RBP10.89□□□□□ -0.67
RTN3-204ENST00000354497 POLQO75417 2590 aa10.89□□□□□ -0.67
RTN3-204ENST00000354497 PCSK5Q92824 1860 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 TMEM191CA6NGB0 347 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 SLC9B1P1A6NJY1 282 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 FANCGO15287 622 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 GSTA1P08263 222 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 EDN3P14138 238 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 CDH3P22223 829 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 CES1P23141 567 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 FOLR3P41439 243 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 CD86P42081 329 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 RANBP1P43487 201 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 KPNA2P52292 529 aaKnown RBP10.88□□□□□ -0.67
RTN3-204ENST00000354497 MRPS35P82673 323 aaKnown RBP10.88□□□□□ -0.67
RTN3-204ENST00000354497 NIPAL4Q0D2K0 466 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 CDC16Q13042 620 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 KRT81Q14533 505 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 DPYSL2Q16555 572 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 DPCR1Q3MIW9 517 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 KHDC1Q4VXA5 237 aaKnown RBP10.88□□□□□ -0.67
RTN3-204ENST00000354497 DCAF10Q5QP82 559 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 CCDC181Q5TID7 509 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 DUS1LQ6P1R4 473 aaKnown RBP10.88□□□□□ -0.67
RTN3-204ENST00000354497 IGFL3Q6UXB1 125 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 OR1L3Q8NH93 324 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 LRRN4Q8WUT4 740 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 TTC25Q96NG3 672 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 GBP5Q96PP8 586 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 LYSMD1Q96S90 227 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 BARD1Q99728 777 aaKnown RBP10.88□□□□□ -0.67
RTN3-204ENST00000354497 YIPF2Q9BWQ6 316 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 ZFATQ9P243 1243 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 PTRH2Q9Y3E5 179 aaKnown RBP10.88□□□□□ -0.67
RTN3-204ENST00000354497 F8P00451 2351 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 APCP25054 2843 aa10.88□□□□□ -0.67
RTN3-204ENST00000354497 ANKRD66B4E2M5 251 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 MFSD11O43934 449 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 IGHEP01854 428 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 HLA-DQB2P05538 268 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 LINGO3P0C6S8 592 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 TCF4P15884 667 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 NAT1P18440 290 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 POLR2CP19387 275 aaPredicted RBP10.87□□□□□ -0.67
RTN3-204ENST00000354497 IL1R2P27930 398 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 PTGER4P35408 488 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 PREPP48147 710 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 CYP2A13Q16696 494 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 CCDC92Q53HC0 331 aaPredicted RBP10.87□□□□□ -0.67
RTN3-204ENST00000354497 CCDC122Q5T0U0 273 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 PLEKHA7Q6IQ23 1121 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 TIGD7Q6NT04 549 aaPredicted RBP10.87□□□□□ -0.67
RTN3-204ENST00000354497 SPOCD1Q6ZMY3 1216 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 ARRDC2Q8TBH0 407 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 SLC35B4Q969S0 331 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 IP6K3Q96PC2 410 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 CCDC28BQ9BUN5 200 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 ADGRE3Q9BY15 652 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 GPR63Q9BZJ6 419 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 PCDH18Q9HCL0 1135 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 RAD18Q9NS91 495 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 NOP53Q9NZM5 478 aaKnown RBP10.87□□□□□ -0.67
RTN3-204ENST00000354497 FAM8A1Q9UBU6 413 aa10.87□□□□□ -0.67
RTN3-204ENST00000354497 PPP2R2CQ9Y2T4 447 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms