RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 H2AFJQ9BTM1 129 aa19.63■□□□□ 0.73
SIGMAR1-202ENST00000353468 GSDMCQ9BYG8 508 aa19.63■□□□□ 0.73
SIGMAR1-202ENST00000353468 CCDC134Q9H6E4 229 aa19.63■□□□□ 0.73
SIGMAR1-202ENST00000353468 PRDM8Q9NQV8 689 aa19.63■□□□□ 0.73
SIGMAR1-202ENST00000353468 NCKIPSDQ9NZQ3 722 aa19.63■□□□□ 0.73
SIGMAR1-202ENST00000353468 APOBEC3BQ9UH17 382 aaKnown RBP19.63■□□□□ 0.73
SIGMAR1-202ENST00000353468 TNRC6BQ9UPQ9 1833 aaKnown RBP19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 ZFC3H1O60293 1989 aaKnown RBP19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 A0A1B0GVT2 93 aa19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 ARHGEF33A8MVX0 844 aa19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 C1orf105O95561 183 aa19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 GUCA1CO95843 209 aa19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 NME1P15531 152 aaKnown RBP19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 DNAJB13P59910 316 aa19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 ASPHQ12797 758 aa19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 UAP1L1Q3KQV9 507 aa19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 WASH2PQ6VEQ5 465 aa19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 ZCCHC23Q6ZST2 131 aa19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 SYT12Q8IV01 421 aa19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 PTGR2Q8N8N7 351 aaPredicted RBP19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 PDPRQ8NCN5 879 aa19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 PPP1R14CQ8TAE6 165 aa19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 WASH6PQ9NQA3 447 aa19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 TBC1D29Q9UFV1 150 aa19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 ASF1AQ9Y294 204 aa19.62■□□□□ 0.73
SIGMAR1-202ENST00000353468 PABPN1LA6NDY0 278 aaKnown RBP19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 S100BP04271 92 aaPredicted RBP19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 BDKRB1P46663 353 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 ALDH18A1P54886 795 aaKnown RBP19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 AP1S2P56377 157 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 CDKL1Q00532 357 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 CLCA4Q14CN2 919 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 PRRT3Q5FWE3 981 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 PEAR1Q5VY43 1037 aaPredicted RBP19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 ABRAXAS1Q6UWZ7 409 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 PRR23BQ6ZRT6 265 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 RAB44Q7Z6P3 723 aaPredicted RBP19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 FBXO15Q8NCQ5 510 aaPredicted RBP19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 RAB3IL1Q8TBN0 382 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 C12orf66Q96MD2 445 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 INSM2Q96T92 566 aaPredicted RBP19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 EGFL8Q99944 293 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 ARL15Q9NXU5 204 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 PCOLCE2Q9UKZ9 415 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 CFAP20Q9Y6A4 193 aaKnown RBP19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 TDRD6O60522 2096 aaKnown RBP19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 ANXA5P08758 320 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 IMPDH1P20839 514 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 LSP1P33241 339 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 NAGLUP54802 743 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 C1orf61Q13536 156 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 CDKL4Q5MAI5 379 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 ATG16L1Q676U5 607 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 SULT1C3Q6IMI6 304 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 RGS9BPQ6ZS82 235 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 TAF8Q7Z7C8 310 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 PHC3Q8NDX5 983 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 OR6Y1Q8NGX8 325 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 MAGEC3Q8TD91 643 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 LRRC61Q9BV99 259 aa19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 GATA5Q9BWX5 397 aaPredicted RBP19.61■□□□□ 0.73
SIGMAR1-202ENST00000353468 KNL1Q8NG31 2342 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 STX16-NPEPL1H3BU86 382 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 STX16O14662 325 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 KLF11O14901 512 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 H2AFYO75367 372 aaKnown RBP19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 RPN2P04844 631 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 SERPINE1P05121 402 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 CELA2BP08218 269 aaPredicted RBP19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 HALP42357 657 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 DPP6P42658 865 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 HNRNPKP61978 463 aaKnown RBP eCLIP19.6■□□□□ 0.734e-6■■□□□ 13.8
SIGMAR1-202ENST00000353468 CBX1P83916 185 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 STX3Q13277 289 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 CCSMST1Q4G0I0 132 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 PRAMEF14Q5SWL7 426 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 MBOAT1Q6ZNC8 495 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 OR5AR1Q8NGP9 310 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 RHBDF1Q96CC6 855 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 TMEM237Q96Q45 408 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 ERVMER34-1Q9H9K5 563 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 SCHIP1Q9P0W5 487 aaPredicted RBP19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 TAAR2Q9P1P5 351 aa19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 PTBP2Q9UKA9 531 aaKnown RBP19.6■□□□□ 0.73
SIGMAR1-202ENST00000353468 TCP11X1B4DZS4 312 aa19.59■□□□□ 0.73
SIGMAR1-202ENST00000353468 SIX3O95343 332 aaPredicted RBP19.59■□□□□ 0.73
SIGMAR1-202ENST00000353468 EML2O95834 649 aa19.59■□□□□ 0.73
SIGMAR1-202ENST00000353468 GRK2P25098 689 aa19.59■□□□□ 0.73
SIGMAR1-202ENST00000353468 HOXD12P35452 270 aa19.59■□□□□ 0.73
SIGMAR1-202ENST00000353468 CTSKP43235 329 aa19.59■□□□□ 0.73
SIGMAR1-202ENST00000353468 AGTR2P50052 363 aa19.59■□□□□ 0.73
SIGMAR1-202ENST00000353468 HERVK_113P63132 956 aa19.59■□□□□ 0.73
SIGMAR1-202ENST00000353468 SETDB1Q15047 1291 aa19.59■□□□□ 0.73
SIGMAR1-202ENST00000353468 ELOCQ15369 112 aa19.59■□□□□ 0.73
SIGMAR1-202ENST00000353468 RPE65Q16518 533 aa19.59■□□□□ 0.73
SIGMAR1-202ENST00000353468 KIF19Q2TAC6 998 aa19.59■□□□□ 0.73
SIGMAR1-202ENST00000353468 FBXO48Q5FWF7 155 aa19.59■□□□□ 0.73
SIGMAR1-202ENST00000353468 ZNF678Q5SXM1 525 aa19.59■□□□□ 0.73
SIGMAR1-202ENST00000353468 CES4AQ5XG92 561 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms