RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 STK16O75716 305 aa21.33■■□□□ 1.01
SHMT1-202ENST00000352886 WDR47O94967 919 aa21.33■■□□□ 1.01
SHMT1-202ENST00000352886 AKT1P31749 480 aa21.33■■□□□ 1.01
SHMT1-202ENST00000352886 CRY1Q16526 586 aa21.33■■□□□ 1.01
SHMT1-202ENST00000352886 ATP13A5Q4VNC0 1218 aa21.33■■□□□ 1.01
SHMT1-202ENST00000352886 RFLNAQ6ZTI6 216 aa21.33■■□□□ 1.01
SHMT1-202ENST00000352886 BPIFB1Q8TDL5 484 aa21.33■■□□□ 1.01
SHMT1-202ENST00000352886 GTF2H4Q92759 462 aa21.33■■□□□ 1.01
SHMT1-202ENST00000352886 ZNF583Q96ND8 569 aa21.33■■□□□ 1.01
SHMT1-202ENST00000352886 BDH2Q9BUT1 245 aa21.33■■□□□ 1.01
SHMT1-202ENST00000352886 RC3H2Q9HBD1 1191 aaKnown RBP21.33■■□□□ 1.01
SHMT1-202ENST00000352886 LRTM1Q9HBL6 345 aa21.33■■□□□ 1.01
SHMT1-202ENST00000352886 ZDHHC3Q9NYG2 299 aa21.33■■□□□ 1.01
SHMT1-202ENST00000352886 A0A1W2PRU2 124 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 MANBAO00462 879 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 TGM5O43548 720 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 ANXA5P08758 320 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 GGT1P19440 569 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 LHCGRP22888 699 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 NFKBIAP25963 317 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 RPIAP49247 311 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 B4GALNT1Q00973 533 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 PTSQ03393 145 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 MAPKAPK3Q16644 382 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 CACHD1Q5VU97 1274 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 METTL2BQ6P1Q9 378 aaKnown RBP21.33■■□□□ 1
SHMT1-202ENST00000352886 RNF165Q6ZSG1 346 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 USP45Q70EL2 814 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 TMC8Q8IU68 726 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 RIMKLAQ8IXN7 391 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 TNIP2Q8NFZ5 429 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 ITFG1Q8TB96 612 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 MTFMTQ96DP5 389 aaKnown RBP21.33■■□□□ 1
SHMT1-202ENST00000352886 COPS8Q99627 209 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 DDX18Q9NVP1 670 aaKnown RBP21.33■■□□□ 1
SHMT1-202ENST00000352886 ARL15Q9NXU5 204 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 ZNHIT2Q9UHR6 403 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 OGDHLQ9ULD0 1010 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 FADS3Q9Y5Q0 445 aa21.33■■□□□ 1
SHMT1-202ENST00000352886 CLOCKO15516 846 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 ANXA6P08133 673 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 PCSK6P29122 969 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 HLA-FP30511 346 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 SLC5A2P31639 672 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 CCR7P32248 378 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 SMU1Q2TAY7 513 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 SPANXN4Q5MJ08 99 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 TBPL2Q6SJ96 375 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 OFCC1Q8IZS5 231 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 DHRSXQ8N5I4 330 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 KRTCAP2Q8N6L1 136 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 SUV39H2Q9H5I1 410 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 CD320Q9NPF0 282 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 ZNF639Q9UID6 485 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 DOCK6Q96HP0 2047 aa21.32■■□□□ 1
SHMT1-202ENST00000352886 LEFTY2O00292 366 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 TULP3O75386 442 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 BMP10O95393 424 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 CBSLP0DN79 551 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 CBSP35520 551 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 CAPGP40121 348 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 PTPN5P54829 565 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 CPSF6Q16630 551 aaKnown RBP eCLIP21.31■■□□□ 1
SHMT1-202ENST00000352886 CYBRD1Q53TN4 286 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 C22orf39Q6P5X5 142 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 SUSD1Q6UWL2 747 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 OR2T12Q8NG77 320 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 USP7Q93009 1102 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 ECHDC3Q96DC8 303 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 THUMPD3Q9BV44 507 aaKnown RBP21.31■■□□□ 1
SHMT1-202ENST00000352886 SOX17Q9H6I2 414 aaPredicted RBP21.31■■□□□ 1
SHMT1-202ENST00000352886 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.31■■□□□ 1
SHMT1-202ENST00000352886 RSL24D1Q9UHA3 163 aaKnown RBP21.31■■□□□ 1
SHMT1-202ENST00000352886 TRAV19A0A0A6YYK7 116 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 SNAP29O95721 258 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 LRG1P02750 347 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 PGRP06401 933 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 LRRC73Q5JTD7 316 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 TMEM214Q6NUQ4 689 aaKnown RBP21.31■■□□□ 1
SHMT1-202ENST00000352886 DNAJC14Q6Y2X3 702 aaPredicted RBP21.31■■□□□ 1
SHMT1-202ENST00000352886 OR10A6Q8NH74 314 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 CLHC1Q8NHS4 586 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 FIG4Q92562 907 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 HIC2Q96JB3 615 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 RNF208Q9H0X6 261 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 ZDHHC6Q9H6R6 413 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 ACTR8Q9H981 624 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 MAFFQ9ULX9 164 aa21.31■■□□□ 1
SHMT1-202ENST00000352886 A0A087WXM4 84 aa21.3■■□□□ 1
SHMT1-202ENST00000352886 GMNNO75496 209 aa21.3■■□□□ 1
SHMT1-202ENST00000352886 CLDN9O95484 217 aa21.3■■□□□ 1
SHMT1-202ENST00000352886 IL6P05231 212 aa21.3■■□□□ 1
SHMT1-202ENST00000352886 PCNAP12004 261 aa21.3■■□□□ 1
SHMT1-202ENST00000352886 GGT5P36269 586 aa21.3■■□□□ 1
SHMT1-202ENST00000352886 OTUD3Q5T2D3 398 aaPredicted RBP21.3■■□□□ 1
SHMT1-202ENST00000352886 GLB1L3Q8NCI6 653 aaPredicted RBP21.3■■□□□ 1
SHMT1-202ENST00000352886 IKZF5Q9H5V7 419 aa21.3■■□□□ 1
SHMT1-202ENST00000352886 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.3■■□□□ 1
SHMT1-202ENST00000352886 C1orf109Q9NX04 203 aa21.3■■□□□ 1
SHMT1-202ENST00000352886 PDE10AQ9Y233 779 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms