RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 CRCPO75575 148 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 KCNH1O95259 989 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 PDYNP01213 254 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 ALPLP05186 524 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 PSMA4P25789 261 aaKnown RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 RPS9P46781 194 aaKnown RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 SLC11A2P49281 568 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 CLCN4P51793 760 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 CRYBA2P53672 197 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 RHOAP61586 193 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 FPGSQ05932 587 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 LMAN2Q12907 356 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 PCBP2Q15366 365 aaKnown RBP eCLIP5.92□□□□□ -1.462e-6■■■■□ 19.6
CLCN3-201ENST00000347613 NEDD8Q15843 81 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 MEP1AQ16819 746 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 AARS2Q5JTZ9 985 aaKnown RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 KRT80Q6KB66 452 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 KLHL35Q6PF15 583 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 BORAQ6PGQ7 559 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 TTC33Q6PID6 262 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 CRTC1Q6UUV9 634 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 KCTD8Q6ZWB6 473 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 RAB44Q7Z6P3 723 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 SNX29P2Q8IUI4 249 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 NPAS4Q8IUM7 802 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 PARP8Q8N3A8 854 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 NKAPQ8N5F7 415 aaKnown RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 CATSPER1Q8NEC5 780 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 ZNF548Q8NEK5 533 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 OR56A4Q8NGH8 313 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 B4GALNT2Q8NHY0 566 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 FIG4Q92562 907 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 ERLEC1Q96DZ1 483 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 APIPQ96GX9 242 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 IGSF21Q96ID5 467 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.92□□□□□ -1.46
CLCN3-201ENST00000347613 SLCO3A1Q9UIG8 710 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 LRRK1Q38SD2 2015 aa5.92□□□□□ -1.46
CLCN3-201ENST00000347613 TRBV5-3A0A0A0MS03 114 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 SGTAO43765 313 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 XYLBO75191 536 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 BMP10O95393 424 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 TRBC1P01850 177 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 GGT1P19440 569 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 CD6P30203 668 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 PTGER3P43115 390 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 MRPL19P49406 292 aaKnown RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 TTPAP49638 278 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 METAP1P53582 386 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 CASP9P55211 416 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 DEFB103AP81534 67 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 COL9A2Q14055 689 aaPredicted RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 CPSF6Q16630 551 aaKnown RBP eCLIP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ATP6AP1LQ52LC2 224 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 USP39Q53GS9 565 aaKnown RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 CARD16Q5EG05 197 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 TMEM215Q68D42 235 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ARHGAP22Q7Z5H3 698 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 SPATA19Q7Z5L4 167 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 DPP10Q8N608 796 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 CHST14Q8NCH0 376 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ZNF461Q8TAF7 563 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ADAMTS16Q8TE57 1224 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 SORCS1Q8WY21 1168 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 GPR63Q9BZJ6 419 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 PAIP1Q9H074 479 aaKnown RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 Q9H521 79 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 HCFC1R1Q9NWW0 138 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 KLQ9UEF7 1012 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 SUN2Q9UH99 717 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 STOML2Q9UJZ1 356 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 PADI4Q9UM07 663 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 CPQQ9Y646 472 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 TMEM229AB2RXF0 380 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 CLOCKO15516 846 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 PRKD3O94806 890 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ENO2P09104 434 aaPredicted RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 MBL2P11226 248 aaPredicted RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ZNF182P17025 639 aaPredicted RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ACRV1P26436 265 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 HTR1EP28566 365 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 AQP6Q13520 282 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 RBBP5Q15291 538 aaKnown RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 IMPG1Q17R60 797 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 TXNDC11Q6PKC3 985 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 CEP68Q76N32 757 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ZC3H7AQ8IWR0 971 aaKnown RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 LMLNQ96KR4 655 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 P2RY13Q9BPV8 354 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 LRRC3Q9BY71 257 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 CD244Q9BZW8 370 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 CCDC68Q9H2F9 335 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 TOR3AQ9H497 397 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ZFYVE1Q9HBF4 777 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 FAM8A1Q9UBU6 413 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 AFF4Q9UHB7 1163 aaKnown RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 TMEFF2Q9UIK5 374 aaPredicted RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ANAPC2Q9UJX6 822 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ZNF490Q9ULM2 529 aaPredicted RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 SLC8A2Q9UPR5 921 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms