RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 IGHV5-51A0A0C4DH38 117 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 PIPSLA2A3N6 862 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 K7ENP7 123 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 RAD1O60671 282 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 STK17BO94768 372 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 USP1O94782 785 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 TTC4O95801 387 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 MT-ND3P03897 115 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 CCNYL3P0C7X3 344 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 CHRM3P20309 590 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 CCR7P32248 378 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 TUBB3Q13509 450 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 TYSND1Q2T9J0 566 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 PLEKHS1Q5SXH7 462 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 RNASEH2BQ5TBB1 312 aaKnown RBP15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 ZNF470Q6ECI4 717 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 INO80CQ6PI98 192 aaPredicted RBP15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 UNC5DQ6UXZ4 953 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 MICALCLQ6ZW33 695 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 CREG2Q8IUH2 290 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 ESX1Q8N693 406 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 OR5AR1Q8NGP9 310 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 OR8K5Q8NH50 307 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 CFAP61Q8NHU2 1237 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 MAGEC3Q8TD91 643 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 N4BP2L2Q92802 583 aaPredicted RBP15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 SLC41A2Q96JW4 573 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 FCRL4Q96PJ5 515 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 FAM167BQ9BTA0 163 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 SYTL2Q9HCH5 934 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 C20orf96Q9NUD7 363 aaPredicted RBP15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 SIDT1Q9NXL6 827 aaKnown RBP15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 OR6C2Q9NZP2 312 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 SEMA5BQ9P283 1151 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 POMT2Q9UKY4 750 aa15.32■□□□□ 0.04
TSPAN4-201ENST00000346501 IQCF5A8MTL0 148 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 GOLGA8KD6RF30 607 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 GOLGA8TH3BQL2 631 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 PGAM1P18669 254 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 AOAHP28039 575 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 ACADLP28330 430 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 FMO4P31512 558 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 ARCN1P48444 511 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 ADARP55265 1226 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 ABRQ12979 859 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 MORF4L2Q15014 288 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 TTLL9Q3SXZ7 439 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 TAF1BQ53T94 588 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 NAPRTQ6XQN6 538 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 TMEM135Q86UB9 458 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 CILP2Q8IUL8 1156 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 DCUN1D3Q8IWE4 304 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 KRT222Q8N1A0 295 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 BBOF1Q8ND07 529 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 NKD1Q969G9 470 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 SLC22A18Q96BI1 424 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 CRELD1Q96HD1 420 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 ELMO2Q96JJ3 720 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 RAB11FIP5Q9BXF6 653 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 P2RY12Q9H244 342 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 APMAPQ9HDC9 416 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 FGF21Q9NSA1 209 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 KCND1Q9NSA2 647 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 LNPEPQ9UIQ6 1025 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 SLC39A10Q9ULF5 831 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 SSUH2Q9Y2M2 353 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 CRYL1Q9Y2S2 319 aa15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 TMEM184BQ9Y519 407 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-201ENST00000346501 CHD6Q8TD26 2715 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 BHMG1C9JSJ3 638 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 BTN3A1O00481 513 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 GPC4O75487 556 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 SLCO2B1O94956 709 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 FGF5P12034 268 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 PKMP14618 531 aaKnown RBP15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 ARNTP27540 789 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 PRDX3P30048 256 aaKnown RBP15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 CCNFP41002 786 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 KPNA2P52292 529 aaKnown RBP15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 PPP1CAP62136 330 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 SH3BP2P78314 561 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 ABHD18Q0P651 414 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 MAP7Q14244 749 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 KCTD19Q17RG1 926 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 XKR5Q6UX68 686 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 C6orf15Q6UXA7 325 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 MAATS1Q7Z4T9 603 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 VASH2Q86V25 355 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 DMXL2Q8TDJ6 3036 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 LPGAT1Q92604 370 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 SNF8Q96H20 258 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 SLC7A5P2Q9GIP4 190 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 XKR8Q9H6D3 395 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 GPN2Q9H9Y4 310 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 ACTR10Q9NZ32 417 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 PILRAQ9UKJ1 303 aa15.3■□□□□ 0.04
TSPAN4-201ENST00000346501 COMMD10Q9Y6G5 202 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms