RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 EIF2B3Q9NR50 452 aaKnown RBP15.7■□□□□ 0.1
RAB5C-201ENST00000346213 POT1Q9NUX5 634 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 B3GALT1Q9Y5Z6 326 aa15.7■□□□□ 0.1
RAB5C-201ENST00000346213 EXOC1LA0A1B0GW35 172 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 OR5K4A6NMS3 321 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 UBXN7O94888 489 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 VIPP01282 170 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 MTHFD1P11586 935 aaKnown RBP15.69■□□□□ 0.1
RAB5C-201ENST00000346213 NMBRP28336 390 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 HADHAP40939 763 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 ELK3P41970 407 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 SESN2P58004 480 aaPredicted RBP15.69■□□□□ 0.1
RAB5C-201ENST00000346213 EIF3IQ13347 325 aaKnown RBP15.69■□□□□ 0.1
RAB5C-201ENST00000346213 CAPRIN2Q6IMN6 1127 aaKnown RBP15.69■□□□□ 0.1
RAB5C-201ENST00000346213 TAOK1Q7L7X3 1001 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 TAS2R42Q7RTR8 314 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 CAND1Q86VP6 1230 aaKnown RBP15.69■□□□□ 0.1
RAB5C-201ENST00000346213 PALM2Q8IXS6 379 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 OR10G6Q8NH81 332 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 ZCCHC2Q9C0B9 1178 aaKnown RBP15.69■□□□□ 0.1
RAB5C-201ENST00000346213 OR52A5Q9H2C5 316 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 TREX1Q9NSU2 369 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 IMP3Q9NV31 184 aaKnown RBP15.69■□□□□ 0.1
RAB5C-201ENST00000346213 SYBUQ9NX95 663 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 SLC24A2Q9UI40 661 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 ACSL6Q9UKU0 697 aa15.69■□□□□ 0.1
RAB5C-201ENST00000346213 EFCAB7A8K855 629 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 ERI2A8K979 691 aaKnown RBP15.68■□□□□ 0.1
RAB5C-201ENST00000346213 HGSO14964 777 aaPredicted RBP15.68■□□□□ 0.1
RAB5C-201ENST00000346213 PSMD3O43242 534 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 SPAG6O75602 509 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 MGAT1P26572 445 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 GCAP28676 217 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 MAGEA3P43357 314 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 CAPZBP47756 277 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 SH3BP2P78314 561 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 SARNPP82979 210 aaKnown RBP15.68■□□□□ 0.1
RAB5C-201ENST00000346213 PDE1BQ01064 536 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 CACNG1Q06432 222 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 ANKS6Q68DC2 871 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 C3orf62Q6ZUJ4 267 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 ZNF771Q7L3S4 317 aaPredicted RBP15.68■□□□□ 0.1
RAB5C-201ENST00000346213 LINC00523Q86TU6 105 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 VASH2Q86V25 355 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 EXOC3L1Q86VI1 746 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 DTX1Q86Y01 620 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 ULK4Q96C45 1275 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 C12orf66Q96MD2 445 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 TGM7Q96PF1 710 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 CMKLR1Q99788 373 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 COG4Q9H9E3 785 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 XAB2Q9HCS7 855 aaKnown RBP15.68■□□□□ 0.1
RAB5C-201ENST00000346213 SDK2Q58EX2 2172 aa15.68■□□□□ 0.1
RAB5C-201ENST00000346213 NVLO15381 856 aaKnown RBP15.67■□□□□ 0.1
RAB5C-201ENST00000346213 TPBGLP0DKB5 382 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 MLNP12872 115 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 SSTR1P30872 391 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 ARCN1P48444 511 aaKnown RBP15.67■□□□□ 0.1
RAB5C-201ENST00000346213 CLPPQ16740 277 aaPredicted RBP15.67■□□□□ 0.1
RAB5C-201ENST00000346213 GPR33Q49SQ1 333 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 SOWAHCQ53LP3 525 aaPredicted RBP15.67■□□□□ 0.1
RAB5C-201ENST00000346213 IGDCC3Q8IVU1 814 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 CFAP206Q8IYR0 622 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 CXorf40BQ96DE9 158 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 AHCYL2Q96HN2 611 aaKnown RBP15.67■□□□□ 0.1
RAB5C-201ENST00000346213 SPRY4Q9C004 299 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 IL1RAPL1Q9NZN1 696 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 CTNNAL1Q9UBT7 734 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 CHMP2BQ9UQN3 213 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 ACTL7BQ9Y614 415 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 DNMT3AQ9Y6K1 912 aaPredicted RBP15.67■□□□□ 0.1
RAB5C-201ENST00000346213 AHCTF1Q8WYP5 2266 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 TEX51A0A1B0GUA7 166 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 HEATR9A2RTY3 570 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 IQCF5A8MTL0 148 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 CAPN5O15484 640 aaPredicted RBP15.67■□□□□ 0.1
RAB5C-201ENST00000346213 GSTA2P09210 222 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 SLC2A4P14672 509 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 ADRA1DP25100 572 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 GUCY1A3Q02108 690 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 TRA2AQ13595 282 aaKnown RBP eCLIP15.67■□□□□ 0.1
RAB5C-201ENST00000346213 KLHL38Q2WGJ6 581 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 FAM92BQ6ZTR7 304 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 VRK3Q8IV63 474 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 TRIM48Q8IWZ4 208 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 HM13Q8TCT9 377 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 MFSD3Q96ES6 412 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 FCRL3Q96P31 734 aaPredicted RBP15.67■□□□□ 0.1
RAB5C-201ENST00000346213 ACSS3Q9H6R3 686 aa15.67■□□□□ 0.1
RAB5C-201ENST00000346213 GOLGA8TH3BQL2 631 aa15.66■□□□□ 0.1
RAB5C-201ENST00000346213 TMX2-CTNND1H3BSU7 103 aa15.66■□□□□ 0.1
RAB5C-201ENST00000346213 RRP8O43159 456 aaKnown RBP15.66■□□□□ 0.1
RAB5C-201ENST00000346213 ZNF28P17035 718 aa15.66■□□□□ 0.1
RAB5C-201ENST00000346213 MLLT3P42568 568 aaPredicted RBP15.66■□□□□ 0.1
RAB5C-201ENST00000346213 CXADRP78310 365 aa15.66■□□□□ 0.1
RAB5C-201ENST00000346213 PACS1Q6VY07 963 aa15.66■□□□□ 0.1
RAB5C-201ENST00000346213 CAPN12Q6ZSI9 719 aa15.66■□□□□ 0.1
RAB5C-201ENST00000346213 TIPARPQ7Z3E1 657 aaKnown RBP15.66■□□□□ 0.1
RAB5C-201ENST00000346213 FAM129CQ86XR2 697 aa15.66■□□□□ 0.1
RAB5C-201ENST00000346213 CYP4X1Q8N118 509 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms