RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 CLCA3PQ9Y6N3 262 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 CNTNAP4Q9C0A0 1308 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 KPNA3O00505 521 aaPredicted RBP11.9□□□□□ -0.5
COL12A1-202ENST00000345356 CPN2P22792 545 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 ARL4DP49703 201 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 LAPTM4AQ15012 233 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 TEAD4Q15561 434 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 KCNJ8Q15842 424 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 UAP1L1Q3KQV9 507 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 MFSD14CQ5VZR4 134 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 UBE2R2Q712K3 238 aaPredicted RBP11.9□□□□□ -0.5
COL12A1-202ENST00000345356 VSIG10LQ86VR7 867 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 SMG7Q92540 1137 aaKnown RBP11.9□□□□□ -0.5
COL12A1-202ENST00000345356 NDRG1Q92597 394 aaKnown RBP11.9□□□□□ -0.5
COL12A1-202ENST00000345356 FUZQ9BT04 418 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 MAF1Q9H063 256 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 ERVK13-1Q9NX77 482 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 E9PAM4 449 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 SIX3O95343 332 aaPredicted RBP11.9□□□□□ -0.5
COL12A1-202ENST00000345356 ABRQ12979 859 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 TSTD2Q5T7W7 516 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 ANKFN1Q8N957 763 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 DEDD2Q8WXF8 326 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 RDH12Q96NR8 316 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 DPCDQ9BVM2 203 aaPredicted RBP11.9□□□□□ -0.5
COL12A1-202ENST00000345356 COLEC11Q9BWP8 271 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 EBPLQ9BY08 206 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 PPIL3Q9H2H8 161 aaKnown RBP11.9□□□□□ -0.5
COL12A1-202ENST00000345356 SGK2Q9HBY8 427 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 NECTIN3Q9NQS3 549 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 MAT2BQ9NZL9 334 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 CNTN3Q9P232 1028 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 WWP2O00308 870 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 ERAL1O75616 437 aaKnown RBP11.9□□□□□ -0.5
COL12A1-202ENST00000345356 APOC3P02656 99 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 MYF6P23409 242 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 ASMTP46597 345 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 DGKQP52824 942 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 RHBDL3P58872 404 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 RPS14P62263 151 aaKnown RBP11.9□□□□□ -0.5
COL12A1-202ENST00000345356 GANABQ14697 944 aaKnown RBP11.9□□□□□ -0.5
COL12A1-202ENST00000345356 C4orf46Q504U0 113 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 KIAA1614Q5VZ46 1190 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 KLHL6Q8WZ60 621 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 KAT2AQ92830 837 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 IL1RAPQ9NPH3 570 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 PRKAG2Q9UGJ0 569 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 HES2Q9Y543 173 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 A0A1W2PP18 115 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 CPSF4LA6NMK7 179 aaKnown RBP11.9□□□□□ -0.5
COL12A1-202ENST00000345356 FAM47E-STBD1D6RA91 191 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 H7C4K7 107 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 MAFO75444 373 aaPredicted RBP11.9□□□□□ -0.5
COL12A1-202ENST00000345356 SCGNO76038 276 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 GMPSP49915 693 aaPredicted RBP11.9□□□□□ -0.5
COL12A1-202ENST00000345356 ZNF280DQ6N043 979 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 OR10Q1Q8NGQ4 319 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 LILRB4Q8NHJ6 448 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 FAM129BQ96TA1 746 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 BEX1Q9HBH7 125 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 SMPD4Q9NXE4 827 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 ZDHHC7Q9NXF8 308 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 RIMKLBQ9ULI2 386 aa11.9□□□□□ -0.5
COL12A1-202ENST00000345356 NT5C1B-RDH14C9J2C7 533 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 PER2O15055 1255 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 PRPS2P11908 318 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 CTPS1P17812 591 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 SERPINA4P29622 427 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 THPOP40225 353 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 CPT1AP50416 773 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 MBTD1Q05BQ5 628 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 SLC39A12Q504Y0 691 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 LYPLAL1Q5VWZ2 237 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 LHPPQ9H008 270 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 RANBP3Q9H6Z4 567 aaPredicted RBP11.89□□□□□ -0.51
COL12A1-202ENST00000345356 DCLK1O15075 740 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 NKRFO15226 690 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL12A1-202ENST00000345356 SORBS2O94875 1100 aaKnown RBP11.89□□□□□ -0.51
COL12A1-202ENST00000345356 UQCRC1P31930 480 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 PTPN9P43378 593 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 NUDT18Q6ZVK8 323 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 ZNF767PQ75MW2 155 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 ZNF438Q7Z4V0 828 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 SLC38A4Q969I6 547 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 NFKBIZQ9BYH8 718 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 POLR2J3Q9H1A7 115 aaKnown RBP11.89□□□□□ -0.51
COL12A1-202ENST00000345356 SLC39A1Q9NY26 324 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 POFUT2Q9Y2G5 429 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 FKBP7Q9Y680 259 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 DIRAS1O95057 198 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 FPR1P21462 350 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 GSTM2P28161 218 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 UFM1P61960 85 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 SNAP47Q5SQN1 464 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 COMMD7Q86VX2 200 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 TRAPPC5Q8IUR0 188 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 DNAJB8Q8NHS0 232 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 SNX33Q8WV41 574 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 XAGE5Q8WWM1 108 aa11.89□□□□□ -0.51
COL12A1-202ENST00000345356 CREB3L1Q96BA8 519 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms