RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 CHST15Q7LFX5 561 aaPredicted RBP17.77■□□□□ 0.44
SMC4-201ENST00000344722 MON1AQ86VX9 555 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 FBXL18Q96ME1 805 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 CCDC3Q9BQI4 270 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 HEPHQ9BQS7 1158 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 USP29Q9HBJ7 922 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 CPNE5Q9HCH3 593 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 ZNF282Q9UDV7 671 aaPredicted RBP17.77■□□□□ 0.44
SMC4-201ENST00000344722 SLC30A8Q8IWU4 369 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 PAK1IP1Q9NWT1 392 aaPredicted RBP17.77■□□□□ 0.44
SMC4-201ENST00000344722 PCDHB9Q9Y5E1 797 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 MYCP01106 439 aaPredicted RBP17.77■□□□□ 0.43
SMC4-201ENST00000344722 ESR1P03372 595 aa17.77■□□□□ 0.43
SMC4-201ENST00000344722 MAPK9P45984 424 aa17.77■□□□□ 0.43
SMC4-201ENST00000344722 PPP2R2BQ00005 443 aa17.77■□□□□ 0.43
SMC4-201ENST00000344722 ADAM15Q13444 863 aa17.77■□□□□ 0.43
SMC4-201ENST00000344722 GARNL3Q5VVW2 1013 aa17.77■□□□□ 0.43
SMC4-201ENST00000344722 EMID1Q96A84 441 aaPredicted RBP17.77■□□□□ 0.43
SMC4-201ENST00000344722 P2RX7Q99572 595 aaKnown RBP17.77■□□□□ 0.43
SMC4-201ENST00000344722 POLR3BQ9NW08 1133 aaPredicted RBP17.77■□□□□ 0.43
SMC4-201ENST00000344722 TVP23BQ9NYZ1 205 aa17.77■□□□□ 0.43
SMC4-201ENST00000344722 ABT1Q9ULW3 272 aaKnown RBP17.77■□□□□ 0.43
SMC4-201ENST00000344722 CHD2O14647 1828 aaKnown RBP17.77■□□□□ 0.43
SMC4-201ENST00000344722 AFDNP55196 1824 aaKnown RBP17.77■□□□□ 0.43
SMC4-201ENST00000344722 CCL22O00626 93 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 APOL3O95236 402 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 HIST1H2ABP04908 130 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 ERP29P30040 261 aaKnown RBP17.76■□□□□ 0.43
SMC4-201ENST00000344722 SLC2A7Q6PXP3 512 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 HIST3H2AQ7L7L0 130 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 DSG4Q86SJ6 1040 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 NAT16Q8N8M0 369 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 HIST1H2ACQ93077 130 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 UTP4Q969X6 686 aaKnown RBP17.76■□□□□ 0.43
SMC4-201ENST00000344722 BTN2A3PQ96KV6 586 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 CEP295NLQ96MC4 621 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 SNNO75324 88 aaPredicted RBP17.76■□□□□ 0.43
SMC4-201ENST00000344722 GSTM2P28161 218 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 HNRNPDQ14103 355 aaKnown RBP17.76■□□□□ 0.43
SMC4-201ENST00000344722 SIDT2Q8NBJ9 832 aaKnown RBP17.76■□□□□ 0.43
SMC4-201ENST00000344722 BRSK1Q8TDC3 778 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 KLHL6Q8WZ60 621 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 AKAP1Q92667 903 aaKnown RBP eCLIP17.76■□□□□ 0.434e-24■■■■■ 140.6
SMC4-201ENST00000344722 MYO19Q96H55 970 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 HNRNPABQ99729 332 aaKnown RBP17.76■□□□□ 0.43
SMC4-201ENST00000344722 BCAS3Q9H6U6 928 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 PITPNM1O00562 1244 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 PTGES3Q15185 160 aaKnown RBP17.76■□□□□ 0.43
SMC4-201ENST00000344722 RNF44Q7L0R7 432 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 WDR48Q8TAF3 677 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 LRRC15Q8TF66 581 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 SLC35C2Q9NQQ7 365 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 DLG5Q8TDM6 1919 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 CHURC1-FNTBB4DL54 471 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 CYP3A5P20815 502 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 PBX3P40426 434 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 MAGEA2P43356 314 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 YBEYP58557 167 aaPredicted RBP17.76■□□□□ 0.43
SMC4-201ENST00000344722 RABL3Q5HYI8 236 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 ZNF433Q8N7K0 673 aaPredicted RBP17.76■□□□□ 0.43
SMC4-201ENST00000344722 TMIEQ8NEW7 156 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 ART5Q96L15 291 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 BCL7BQ9BQE9 202 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 GLIS2Q9BZE0 524 aaPredicted RBP17.76■□□□□ 0.43
SMC4-201ENST00000344722 ABHD16BQ9H3Z7 469 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 MAFBQ9Y5Q3 323 aaPredicted RBP17.76■□□□□ 0.43
SMC4-201ENST00000344722 CKBP12277 381 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 SCNN1AP37088 669 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 RPIAP49247 311 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 NDST2P52849 883 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 MBTD1Q05BQ5 628 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 ZDHHC20Q5W0Z9 365 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 HACD2Q6Y1H2 254 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 CDHR3Q6ZTQ4 885 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 LGI4Q8N135 537 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 MFSD1Q9H3U5 465 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 TM9SF3Q9HD45 589 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 POLR1DQ9Y2S0 133 aa17.76■□□□□ 0.43
SMC4-201ENST00000344722 MRC1P22897 1456 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 WNT10BO00744 389 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 OXSR1O95747 527 aaPredicted RBP17.75■□□□□ 0.43
SMC4-201ENST00000344722 AHSGP02765 367 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 C2orf80Q0P641 193 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 LAPTM5Q13571 262 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 SIX1Q15475 284 aaPredicted RBP17.75■□□□□ 0.43
SMC4-201ENST00000344722 CAPN13Q6MZZ7 669 aaPredicted RBP17.75■□□□□ 0.43
SMC4-201ENST00000344722 PPP1R14AQ96A00 147 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 MAPKAP1Q9BPZ7 522 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 ANKRD60Q9BZ19 345 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 SMOXQ9NWM0 555 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 MYH8P13535 1937 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 PMS2P3Q13401 168 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 ZNHIT3Q15649 155 aaPredicted RBP17.75■□□□□ 0.43
SMC4-201ENST00000344722 PIGXQ8TBF5 258 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 COPS5Q92905 334 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 RAD51AP1Q96B01 352 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 BORCS6Q96GS4 357 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 CCDC115Q96NT0 180 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 TM6SF2Q9BZW4 377 aa17.75■□□□□ 0.43
SMC4-201ENST00000344722 C3orf14Q9HBI5 128 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms