RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 CT55Q8WUE5 264 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 CPT1BQ92523 772 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 ELMO1Q92556 727 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 TFGQ92734 400 aaPredicted RBP12.06□□□□□ -0.48
SGCA-202ENST00000344627 MR1Q95460 341 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 HDAC10Q969S8 669 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 PSMG3-AS1Q96PY0 264 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 TTC1Q99614 292 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 FRMD8P1Q9BZ68 369 aaPredicted RBP12.06□□□□□ -0.48
SGCA-202ENST00000344627 SLC7A5P2Q9GIP4 190 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 ACTL8Q9H568 366 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 XKR8Q9H6D3 395 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 MLXIPLQ9NP71 852 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 RAB6BQ9NRW1 208 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 CUEDC1Q9NWM3 386 aaPredicted RBP12.06□□□□□ -0.48
SGCA-202ENST00000344627 TLK1Q9UKI8 766 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 BTRCQ9Y297 605 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 ZNF451Q9Y4E5 1061 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 HECTD1Q9ULT8 2610 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 SEC16AO15027 2179 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 IGLV3-16A0A075B6K0 115 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 TRBV5-4A0A0C4DH59 114 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 HEATR9A2RTY3 570 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 ERI2A8K979 691 aaKnown RBP12.05□□□□□ -0.48
SGCA-202ENST00000344627 SCRG1O75711 98 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 AP2A2O94973 939 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 IGHEP01854 428 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 FTH1P02794 183 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 HBQ1P09105 142 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 ETS1P14921 441 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 NSG1P42857 185 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 PGDP52209 483 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 CSE1LP55060 971 aaKnown RBP12.05□□□□□ -0.48
SGCA-202ENST00000344627 RPA4Q13156 261 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 LAMB3Q13751 1172 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 FAM199XQ6PEV8 388 aaPredicted RBP12.05□□□□□ -0.48
SGCA-202ENST00000344627 NAPRTQ6XQN6 538 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 MED25Q71SY5 747 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 PRUNE1Q86TP1 453 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 IP6K3Q96PC2 410 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 TLR10Q9BXR5 811 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 KLHL25Q9H0H3 589 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 OR52A5Q9H2C5 316 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 MVB12BQ9H7P6 319 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 LRRC4CQ9HCJ2 640 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 ACSS2Q9NR19 701 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 C1GALT1Q9NS00 363 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 TDRKHQ9Y2W6 561 aaKnown RBP12.05□□□□□ -0.48
SGCA-202ENST00000344627 PRSS21Q9Y6M0 314 aa12.05□□□□□ -0.48
SGCA-202ENST00000344627 MROH6A6NGR9 719 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 F8W8V4 182 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 QSOX1O00391 747 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 BTN3A1O00481 513 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 DPM1O60762 260 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 GOT2P00505 430 aaKnown RBP12.04□□□□□ -0.48
SGCA-202ENST00000344627 APRTP07741 180 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 FURINP09958 794 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 OR56A5P0C7T3 313 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 CYP2A7P20853 494 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 PRDX3P30048 256 aaKnown RBP12.04□□□□□ -0.48
SGCA-202ENST00000344627 CD151P48509 253 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 RRADP55042 308 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 PRAMEP78395 509 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 BOP1Q14137 746 aaKnown RBP12.04□□□□□ -0.48
SGCA-202ENST00000344627 ITIH4Q14624 930 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 OASLQ15646 514 aaKnown RBP12.04□□□□□ -0.48
SGCA-202ENST00000344627 TSTD2Q5T7W7 516 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 FHL5Q5TD97 284 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 LYPLAL1Q5VWZ2 237 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 GSTA5Q7RTV2 222 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 TMEM135Q86UB9 458 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 AMIGO1Q86WK6 493 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 TMEM102Q8N9M5 508 aaPredicted RBP12.04□□□□□ -0.48
SGCA-202ENST00000344627 OR52E1Q8NGJ3 308 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 N4BP2L2Q92802 583 aaPredicted RBP12.04□□□□□ -0.48
SGCA-202ENST00000344627 ZNF501Q96CX3 271 aaPredicted RBP12.04□□□□□ -0.48
SGCA-202ENST00000344627 CLIP3Q96DZ5 547 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 NRTNQ99748 197 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 DHRS4Q9BTZ2 278 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 SLC25A23Q9BV35 468 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 NLNQ9BYT8 704 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 SLC29A3Q9BZD2 475 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 AKIRIN1Q9H9L7 192 aaPredicted RBP12.04□□□□□ -0.48
SGCA-202ENST00000344627 LZTFL1Q9NQ48 299 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 SLC2A6Q9UGQ3 507 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 POMT2Q9UKY4 750 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 ASF1AQ9Y294 204 aa12.04□□□□□ -0.48
SGCA-202ENST00000344627 TTLL8A6PVC2 850 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 C2orf74A8MZ97 194 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 TMEM150CB9EJG8 249 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 BTN3A3O00478 584 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 LIN7AO14910 233 aaPredicted RBP12.03□□□□□ -0.48
SGCA-202ENST00000344627 OR1I1O60431 355 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 CEACAM4O75871 244 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 DDAH2O95865 285 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 ZSCAN5DPP0CG00 497 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 PVRP15151 417 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 ADRA1DP25100 572 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 FOXN2P32314 431 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 PPARGP37231 505 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms