RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 PAGE3Q5JUK9 113 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 C6orf136Q5SQH8 315 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 ZNF534Q76KX8 674 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 VN1R5Q7Z5H4 357 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 ITIH5Q86UX2 942 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 ANKRD49Q8WVL7 239 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 RTP4Q96DX8 246 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 PCDHGA3Q9Y5H0 932 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 PRR23AA6NEV1 266 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 PAICSP22234 425 aaKnown RBP12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 SNRPD2P62316 118 aaKnown RBP12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 NUMA1Q14980 2115 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 CLCA4Q14CN2 919 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 VEPH1Q14D04 833 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 USP39Q53GS9 565 aaKnown RBP12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 CES4AQ5XG92 561 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 DESI1Q6ICB0 168 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 COLGALT2Q8IYK4 626 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 OR13J1Q8NGT2 312 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 SLC9A7Q96T83 725 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 SLC30A3Q99726 388 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 MEAF6Q9HAF1 191 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 BOLA1Q9Y3E2 137 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 A0A1W2PQH9 124 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 TCRBV3S1A0A5B6 114 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 J3KR12 359 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 ACOT8O14734 319 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 POLR2IP36954 125 aaKnown RBP12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 APOFQ13790 326 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 SF3B4Q15427 424 aaKnown RBP eCLIP12.31□□□□□ -0.443e-6■■■■□ 22.3
SSX2IP-201ENST00000342203 C5orf22Q49AR2 442 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 TMEM86AQ8N2M4 240 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 TMEM199Q8N511 208 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 ZNF614Q8N883 585 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 ZNF486Q96H40 463 aaPredicted RBP12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 Q96MT0 163 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 RNF39Q9H2S5 420 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 ARMC1Q9NVT9 282 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 PCDH10Q9P2E7 1040 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 CFL2Q9Y281 166 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 DNMT3AQ9Y6K1 912 aaPredicted RBP12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 ISPDA4D126 451 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 CYP3A5P20815 502 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 GSTM2P28161 218 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 NNMTP40261 264 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 LCN8Q6JVE9 175 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 MINDY1Q8N5J2 469 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 OR7D4Q8NG98 312 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 OLIG1Q8TAK6 271 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 C3orf30Q96M34 536 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 CHD4Q14839 1912 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 STK16O75716 305 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 PGRP06401 933 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 RPS14P62263 151 aaKnown RBP12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 SLC36A3Q495N2 470 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 ARMC12Q5T9G4 340 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 RETREG3Q86VR2 466 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 ZNF671Q8TAW3 534 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 RPL3LQ92901 407 aaKnown RBP12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 PYCR2Q96C36 320 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 C11orf24Q96F05 449 aaPredicted RBP12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 NPY6RQ99463 290 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 FBXO44Q9H4M3 255 aa12.31□□□□□ -0.44
SSX2IP-201ENST00000342203 A0A1B0GW55 424 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 TRBC1P01850 177 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 DUX4L2P0CJ85 424 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 DUX4L3P0CJ86 424 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 DUX4L4P0CJ87 422 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 DUX4L5P0CJ88 424 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 DUX4L6P0CJ89 424 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 DUX4L7P0CJ90 424 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 FOXA1P55317 472 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 HUNKP57058 714 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 XKR6Q5GH73 641 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 NPWQ8N729 165 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 ZNF641Q96N77 438 aaPredicted RBP12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 CDK5RAP1Q96SZ6 601 aaKnown RBP12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 SLC30A2Q9BRI3 323 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 CIPCQ9C0C6 399 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 C12orf4Q9NQ89 552 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 TAS2R9Q9NYW1 312 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 DUX4Q9UBX2 424 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 TIAM2Q8IVF5 1701 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 ERN1O75460 977 aaKnown RBP12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 NDST3O95803 873 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 VIPP01282 170 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 DNTTP04053 509 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 ARRB2P32121 409 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 DNAJB13P59910 316 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 SEMG2Q02383 582 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 GANABQ14697 944 aaKnown RBP12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 LINGO4Q6UY18 593 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 TINF2Q9BSI4 451 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 MMP27Q9H306 513 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 AASDHPPTQ9NRN7 309 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 TMEM181Q9P2C4 612 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 TOPAZ1Q8N9V7 1692 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 ZNF701M0R085 212 aaPredicted RBP12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 C4BPBP20851 252 aa12.3□□□□□ -0.44
SSX2IP-201ENST00000342203 CYP2A7P20853 494 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms