RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 PDLIM1O00151 329 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 RECQL5O94762 991 aaPredicted RBP9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 CPSF4O95639 269 aaKnown RBP9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 PRDX6P30041 224 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 SATB1Q01826 763 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 GPR33Q49SQ1 333 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 GTDC1Q4AE62 458 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 FBXO30Q8TB52 745 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 CANT1Q8WVQ1 401 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 JADE3Q92613 823 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 MAELQ96JY0 434 aaKnown RBP9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 TMEM79Q9BSE2 394 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 SCOCQ9UIL1 159 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 PRPF19Q9UMS4 504 aaKnown RBP9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 NME4O00746 187 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 GMNNO75496 209 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 WISP3O95389 354 aaPredicted RBP9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 CYP2A7P20853 494 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 CYP4F2P78329 520 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 OTUD3Q5T2D3 398 aaPredicted RBP9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 C11orf96Q7Z7L8 435 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 TMPRSS11BQ86T26 416 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 VPS50Q96JG6 964 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 RPP25Q9BUL9 199 aaKnown RBP9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 GID8Q9NWU2 228 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 BCAP29Q9UHQ4 241 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 AP4S1Q9Y587 144 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 RNASEH2AO75792 299 aaKnown RBP9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 PENKP01210 267 aaPredicted RBP9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 ATP6V1B2P21281 511 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 MED21Q13503 144 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 ZNF805Q5CZA5 627 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 SPANXN4Q5MJ08 99 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 SAMD4BQ5PRF9 694 aaKnown RBP9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 PGM2L1Q6PCE3 622 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 GCNT7Q6ZNI0 430 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 Q6ZSR9 355 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 GALNT7Q86SF2 657 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 PHACTR4Q8IZ21 702 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 RGL4Q8IZJ4 473 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 ZNF483Q8TF39 744 aaPredicted RBP9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 OR8D1Q8WZ84 308 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 SH3KBP1Q96B97 665 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 RHBDF1Q96CC6 855 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 CD244Q9BZW8 370 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 FZD3Q9NPG1 666 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 TMPRSS11EQ9UL52 423 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 RIMKLBQ9ULI2 386 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 PNMA8BQ9ULN7 279 aaPredicted RBP9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 VPS4AQ9UN37 437 aa9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 EIF3LQ9Y262 564 aaKnown RBP9.95□□□□□ -0.82
RBFOX1-202ENST00000340209 TRBV23OR9-2A0A075B6M9 112 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 WNT9AO14904 365 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 LIPEQ05469 1076 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 TRIM25Q14258 630 aaKnown RBP9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 ZNF234Q14588 700 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 BRAT1Q6PJG6 821 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 LRRC58Q96CX6 371 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 LRTM1Q9HBL6 345 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 LMCD1Q9NZU5 365 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 LRCH1Q9Y2L9 728 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 H7C0S8 307 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 STX16O14662 325 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 SMNDC1O75940 238 aaKnown RBP eCLIP9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 PGM3O95394 542 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 NFATC1O95644 943 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 NTRK1P04629 796 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 IL12AP29459 219 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 ERVK-8P63133 956 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 TMEM115Q12893 351 aaPredicted RBP9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 GK3PQ14409 553 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 SZRD1Q7Z422 152 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 ASZ1Q8WWH4 475 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 EGLN2Q96KS0 407 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 RNF145Q96MT1 663 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 FOPNLQ96NB1 174 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 GNG14A0A1W2PPG7 69 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 RGS14O43566 566 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 RSL1D1O76021 490 aaKnown RBP9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 PDYNP01213 254 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 VARSP26640 1264 aaKnown RBP9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 RPL26P61254 145 aaKnown RBP9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 TRAF3Q13114 568 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 GTF2H3Q13889 308 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 LRP8Q14114 963 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 CACHD1Q5VU97 1274 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 GALNT10Q86SR1 603 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 METTL3Q86U44 580 aaKnown RBP9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 RASGEF1AQ8N9B8 481 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 ZNF382Q96SR6 550 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 VCX3BQ9H321 246 aa9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 RPL26L1Q9UNX3 145 aaKnown RBP9.94□□□□□ -0.82
RBFOX1-202ENST00000340209 H3BM21 787 aa9.93□□□□□ -0.82
RBFOX1-202ENST00000340209 CLDN9O95484 217 aa9.93□□□□□ -0.82
RBFOX1-202ENST00000340209 KRT6AP02538 564 aa9.93□□□□□ -0.82
RBFOX1-202ENST00000340209 KRT6BP04259 564 aa9.93□□□□□ -0.82
RBFOX1-202ENST00000340209 KRT6CP48668 564 aa9.93□□□□□ -0.82
RBFOX1-202ENST00000340209 INHBCP55103 352 aa9.93□□□□□ -0.82
RBFOX1-202ENST00000340209 EGFLAMQ63HQ2 1017 aa9.93□□□□□ -0.82
RBFOX1-202ENST00000340209 SULT1C3Q6IMI6 304 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms