RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 CSHL1Q14406 222 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 KRT33BQ14525 404 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 NR0B2Q15466 257 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 TBC1D21Q8IYX1 336 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 CENPLQ8N0S6 344 aaPredicted RBP21.61■■□□□ 1.05
SDC3-202ENST00000339394 OR5K2Q8NHB8 316 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 CNDP2Q96KP4 475 aaKnown RBP21.61■■□□□ 1.05
SDC3-202ENST00000339394 DERL2Q9GZP9 239 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 IKZF3Q9UKT9 509 aa21.61■■□□□ 1.05
SDC3-202ENST00000339394 GFYI3L273 518 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 NUDT21O43809 227 aaKnown RBP21.6■■□□□ 1.05
SDC3-202ENST00000339394 PSIP1O75475 530 aaKnown RBP21.6■■□□□ 1.05
SDC3-202ENST00000339394 C1orf105O95561 183 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 LDOC1O95751 146 aaPredicted RBP21.6■■□□□ 1.05
SDC3-202ENST00000339394 CKMT1AP12532 417 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 GLB1P16278 677 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 NDUFS1P28331 727 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 DLG1Q12959 904 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 PRKG2Q13237 762 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 BIRC2Q13490 618 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.6■■□□□ 1.05
SDC3-202ENST00000339394 CROCCP2Q86T23 111 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 AVL9Q8NBF6 648 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 NETO1Q8TDF5 533 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 ANKRD7Q92527 254 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 TRIT1Q9H3H1 467 aaKnown RBP21.6■■□□□ 1.05
SDC3-202ENST00000339394 STN1Q9H668 368 aaKnown RBP21.6■■□□□ 1.05
SDC3-202ENST00000339394 MVB12BQ9H7P6 319 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 IGSF5Q9NSI5 407 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 LRIT1Q9P2V4 623 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 ADAMTS6Q9UKP5 1117 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 RNF215Q9Y6U7 377 aa21.6■■□□□ 1.05
SDC3-202ENST00000339394 PTPRZ1P23471 2315 aaPredicted RBP21.6■■□□□ 1.05
SDC3-202ENST00000339394 ARID1BQ8NFD5 2236 aaPredicted RBP21.59■■□□□ 1.05
SDC3-202ENST00000339394 GOLGA8RI6L899 631 aa21.59■■□□□ 1.05
SDC3-202ENST00000339394 CD1DP15813 335 aa21.59■■□□□ 1.05
SDC3-202ENST00000339394 MAPK9P45984 424 aa21.59■■□□□ 1.05
SDC3-202ENST00000339394 SH2D5Q6ZV89 423 aa21.59■■□□□ 1.05
SDC3-202ENST00000339394 PIP4P1Q86T03 277 aa21.59■■□□□ 1.05
SDC3-202ENST00000339394 RASGRP3Q8IV61 690 aa21.59■■□□□ 1.05
SDC3-202ENST00000339394 PLD6Q8N2A8 252 aaKnown RBP21.59■■□□□ 1.05
SDC3-202ENST00000339394 BAHD1Q8TBE0 780 aaPredicted RBP21.59■■□□□ 1.05
SDC3-202ENST00000339394 ACMSDQ8TDX5 336 aa21.59■■□□□ 1.05
SDC3-202ENST00000339394 KCTD4Q8WVF5 259 aa21.59■■□□□ 1.05
SDC3-202ENST00000339394 DLG3Q92796 817 aa21.59■■□□□ 1.05
SDC3-202ENST00000339394 PCMTD2Q9NV79 361 aa21.59■■□□□ 1.05
SDC3-202ENST00000339394 FTSJ1Q9UET6 329 aa21.59■■□□□ 1.05
SDC3-202ENST00000339394 EME2A4GXA9 379 aaPredicted RBP21.58■■□□□ 1.05
SDC3-202ENST00000339394 CDC7O00311 574 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 BTN3A1O00481 513 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 RGS16O15492 202 aaPredicted RBP21.58■■□□□ 1.05
SDC3-202ENST00000339394 KLHL2O95198 593 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 RPN2P04844 631 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 LTA4HP09960 611 aaKnown RBP21.58■■□□□ 1.05
SDC3-202ENST00000339394 PYGBP11216 843 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 FAM83EQ2M2I3 478 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 GUSBP11Q6P575 273 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 UBE2R2Q712K3 238 aaPredicted RBP21.58■■□□□ 1.05
SDC3-202ENST00000339394 RBM12BQ8IXT5 1001 aaKnown RBP21.58■■□□□ 1.05
SDC3-202ENST00000339394 OR6C4Q8NGE1 309 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 ZFPM2Q8WW38 1151 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 NXNL1Q96CM4 212 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 CABS1Q96KC9 395 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 RUFY1Q96T51 708 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 HGH1Q9BTY7 390 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 CENPHQ9H3R5 247 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 KIR3DX1Q9H7L2 352 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 VIPAS39Q9H9C1 493 aa21.58■■□□□ 1.05
SDC3-202ENST00000339394 ARHGEF17Q96PE2 2063 aaPredicted RBP21.58■■□□□ 1.04
SDC3-202ENST00000339394 RHPN2P1A8MT19 583 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 ARHGEF33A8MVX0 844 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 AGPSO00116 658 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 ZBTB14O43829 449 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 TOP3BO95985 862 aaKnown RBP21.57■■□□□ 1.04
SDC3-202ENST00000339394 CATP04040 527 aaKnown RBP21.57■■□□□ 1.04
SDC3-202ENST00000339394 C8GP07360 202 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 CKMT2P17540 419 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 BDKRB1P46663 353 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 ATP6V0D1P61421 351 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 DAB2P98082 770 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 GPR18Q14330 331 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 CCSMST1Q4G0I0 132 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.57■■□□□ 1.04
SDC3-202ENST00000339394 TMEM26Q6ZUK4 368 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 TRABD2AQ86V40 505 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 ZNF761Q86XN6 746 aaPredicted RBP21.57■■□□□ 1.04
SDC3-202ENST00000339394 DCUN1D3Q8IWE4 304 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 SLC12A9Q9BXP2 914 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 POLG2Q9UHN1 485 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 TDRKHQ9Y2W6 561 aaKnown RBP21.57■■□□□ 1.04
SDC3-202ENST00000339394 ASCC3Q8N3C0 2202 aaKnown RBP21.57■■□□□ 1.04
SDC3-202ENST00000339394 CPED1A4D0V7 1026 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 NPEPPSL1A6NEC2 478 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 SLC16A5O15375 505 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 SASH3O75995 380 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 MYZAPP0CAP1 466 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 COL6A2P12110 1019 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 KRT4P19013 534 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 CCNFP41002 786 aa21.57■■□□□ 1.04
SDC3-202ENST00000339394 DUSP3P51452 185 aaPredicted RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms