RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 POM121L1PQ3SYA9 428 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 RNF219Q5W0B1 726 aaPredicted RBP13.89□□□□□ -0.19
PCDH8-201ENST00000338862 GOLGA7Q7Z5G4 137 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 NETO1Q8TDF5 533 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 RSPH1Q8WYR4 309 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 PROX1Q92786 737 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 ZNF599Q96NL3 588 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 REEP1Q9H902 201 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 CNTRLQ7Z7A1 2325 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 RGS10O43665 173 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 ENO2P09104 434 aaPredicted RBP13.88□□□□□ -0.19
PCDH8-201ENST00000338862 HIST1H2AGP0C0S8 130 aaPredicted RBP13.88□□□□□ -0.19
PCDH8-201ENST00000338862 TNFRSF1BP20333 461 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 HIST1H2ADP20671 130 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 GNPDA1P46926 289 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 TMBIM6P55061 237 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 MXD1Q05195 221 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 RCAN2Q14206 197 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 MFSD4BQ5TF39 518 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 TXNDC11Q6PKC3 985 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 ZNF280BQ86YH2 543 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 CHDHQ8NE62 594 aaPredicted RBP13.88□□□□□ -0.19
PCDH8-201ENST00000338862 OR13F1Q8NGS4 319 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 L3HYPDHQ96EM0 354 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 MED8Q96G25 268 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 HIST1H2AHQ96KK5 128 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 HIST1H2AJQ99878 128 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 H2AFJQ9BTM1 129 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 WDR12Q9GZL7 423 aaKnown RBP13.88□□□□□ -0.19
PCDH8-201ENST00000338862 LOC730098B7Z3J9 87 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 AIREO43918 545 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 MTX2O75431 263 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 CREG1O75629 220 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 CTU2Q2VPK5 515 aaKnown RBP13.88□□□□□ -0.19
PCDH8-201ENST00000338862 SOWAHCQ53LP3 525 aaPredicted RBP13.88□□□□□ -0.19
PCDH8-201ENST00000338862 OR4F3Q6IEY1 312 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 RBM23Q86U06 439 aaKnown RBP13.88□□□□□ -0.19
PCDH8-201ENST00000338862 AKAP14Q86UN6 197 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 CCDC117Q8IWD4 279 aaPredicted RBP13.88□□□□□ -0.19
PCDH8-201ENST00000338862 C7orf57Q8NEG2 295 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 ZNF347Q96SE7 839 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 APOL4Q9BPW4 351 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 NEURL2Q9BR09 285 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 BOCQ9BWV1 1114 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 EHD1Q9H4M9 534 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 GNG14A0A1W2PPG7 69 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 PDZK1P1A8MUH7 402 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 PRMT5O14744 637 aaPredicted RBP13.88□□□□□ -0.19
PCDH8-201ENST00000338862 FFAR2O15552 330 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 OTCP00480 354 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 EPB42P16452 691 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 SOAT1P35610 550 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 ZNF135P52742 658 aaPredicted RBP13.88□□□□□ -0.19
PCDH8-201ENST00000338862 EMX1Q04741 257 aaPredicted RBP13.88□□□□□ -0.19
PCDH8-201ENST00000338862 TAGAPQ8N103 731 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 TMEM132CQ8N3T6 1108 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 UBASH3BQ8TF42 649 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 ZBED2Q9BTP6 218 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 BEX2Q9BXY8 128 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 DCSTAMPQ9H295 470 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 IKZF5Q9H5V7 419 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 PCTPQ9UKL6 214 aa13.88□□□□□ -0.19
PCDH8-201ENST00000338862 PHIPQ8WWQ0 1821 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 CCNKO75909 580 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 ALPLP05186 524 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 TTPAP49638 278 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 ZNF648Q5T619 568 aaPredicted RBP13.87□□□□□ -0.19
PCDH8-201ENST00000338862 Q6ZSR9 355 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 CADM3Q8N126 398 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 LINC01465Q8N7H1 131 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 OTULINQ96BN8 352 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 MTERF1Q99551 399 aaKnown RBP13.87□□□□□ -0.19
PCDH8-201ENST00000338862 AMBRA1Q9C0C7 1298 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 NUAK2Q9H093 628 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 RAPGEFL1Q9UHV5 662 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 PCDHB5Q9Y5E4 795 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 PCDHGA4Q9Y5G9 962 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 TRPV2Q9Y5S1 764 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 COL11A1P12107 1806 aaPredicted RBP13.87□□□□□ -0.19
PCDH8-201ENST00000338862 MGEA5O60502 916 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 PBLDP30039 288 aaPredicted RBP13.87□□□□□ -0.19
PCDH8-201ENST00000338862 GRK3P35626 688 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 HACD2Q6Y1H2 254 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 SPATC1Q76KD6 591 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 SPRED1Q7Z699 444 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 SYT12Q8IV01 421 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 TANKQ92844 425 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 EGLN2Q96KS0 407 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 BTN2A3PQ96KV6 586 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 INPP5KQ9BT40 448 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 ADGRE3Q9BY15 652 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 FAM126AQ9BYI3 521 aaPredicted RBP13.87□□□□□ -0.19
PCDH8-201ENST00000338862 TLR8Q9NR97 1041 aaKnown RBP13.87□□□□□ -0.19
PCDH8-201ENST00000338862 WNK3Q9BYP7 1800 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 GON4LQ3T8J9 2241 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 NUMA1Q14980 2115 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 TULP3O75386 442 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 CYP11A1P05108 521 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 COX7A2P14406 83 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 GJA5P36382 358 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms