RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ST8SIA6P61647 398 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 GALNT1Q10472 559 aaPredicted RBP12.31□□□□□ -0.44
LIMK1-201ENST00000336180 C6orf52Q5T4I8 152 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 PRAMEF9Q5VWM5 478 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 AHI1Q8N157 1196 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 CANT1Q8WVQ1 401 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 CHFRQ96EP1 664 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 EGLN2Q96KS0 407 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 SAMD11Q96NU1 681 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 SEPHS2Q99611 448 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 TBCDQ9BTW9 1192 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 SLC6A17Q9H1V8 727 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 PTBP2Q9UKA9 531 aaKnown RBP12.31□□□□□ -0.44
LIMK1-201ENST00000336180 PRPF19Q9UMS4 504 aaKnown RBP12.31□□□□□ -0.44
LIMK1-201ENST00000336180 DOCK9Q9BZ29 2069 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 SDK1Q7Z5N4 2213 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 LAMA1P25391 3075 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 DPPA5A6NC42 116 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 OR56A5P0C7T3 313 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 HALP42357 657 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 NEK5Q6P3R8 708 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 FBXL19Q6PCT2 694 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 SLC15A3Q8IY34 581 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 RGL4Q8IZJ4 473 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 RASGEF1AQ8N9B8 481 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 PROKR1Q8TCW9 393 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 CLIP3Q96DZ5 547 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 MTERF1Q99551 399 aaKnown RBP12.31□□□□□ -0.44
LIMK1-201ENST00000336180 CD244Q9BZW8 370 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 PLAGL1Q9UM63 463 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 DTNAQ9Y4J8 743 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 KLK8O60259 260 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 STK16O75716 305 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 OXTRP30559 389 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 EPHA5P54756 1037 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 MEF2AQ02078 507 aaPredicted RBP12.3□□□□□ -0.44
LIMK1-201ENST00000336180 PPP1R8Q12972 351 aaKnown RBP12.3□□□□□ -0.44
LIMK1-201ENST00000336180 HERC3Q15034 1050 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 ANKRD26P1Q6NSI1 321 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 TXNDC11Q6PKC3 985 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 TMEM220Q6QAJ8 160 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 MACC1Q6ZN28 852 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 TRAPPC5Q8IUR0 188 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
LIMK1-201ENST00000336180 HERVK_113Q902F9 699 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 ARRDC3Q96B67 414 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 LRRC58Q96CX6 371 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 MCCC1Q96RQ3 725 aaPredicted RBP12.3□□□□□ -0.44
LIMK1-201ENST00000336180 TUBGCP5Q96RT8 1024 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 CIB1Q99828 191 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 PLA2G2FQ9BZM2 168 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 OR2AG1Q9H205 316 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 SDR39U1Q9NRG7 319 aaPredicted RBP12.3□□□□□ -0.44
LIMK1-201ENST00000336180 AIG1Q9NVV5 245 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 PKD2L2Q9NZM6 624 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 PSMD13Q9UNM6 376 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 A0A1B0GTW7 788 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 PDLIM1O00151 329 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 EPORP19235 508 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 TACR1P25103 407 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 RPL10P27635 214 aaKnown RBP12.3□□□□□ -0.44
LIMK1-201ENST00000336180 PSMD8P48556 350 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 POLR2JP52435 117 aaKnown RBP12.3□□□□□ -0.44
LIMK1-201ENST00000336180 TRIM25Q14258 630 aaKnown RBP12.3□□□□□ -0.44
LIMK1-201ENST00000336180 CWF19L1Q69YN2 538 aaKnown RBP12.3□□□□□ -0.44
LIMK1-201ENST00000336180 CYP20A1Q6UW02 462 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 RAVER1Q8IY67 606 aaKnown RBP12.3□□□□□ -0.44
LIMK1-201ENST00000336180 LIX1Q8N485 282 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 CNBD2Q96M20 576 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 ZNF382Q96SR6 550 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 KLHL4Q9C0H6 718 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 NKX2-4Q9H2Z4 354 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 ACTL8Q9H568 366 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 KCTD5Q9NXV2 234 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 TBC1D14Q9P2M4 693 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 OARD1Q9Y530 152 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 KANSL1LA0AUZ9 987 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 PEX14O75381 377 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 GBAP04062 536 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 EPHX1P07099 455 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 CISD3P0C7P0 127 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 PCNAP12004 261 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 EPB42P16452 691 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 FUT4P22083 530 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 SLC6A2P23975 617 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 PSMA3P25788 255 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 VIPR1P32241 457 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 ZFP36L2P47974 494 aaKnown RBP12.3□□□□□ -0.44
LIMK1-201ENST00000336180 CASP9P55211 416 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 RPL26P61254 145 aaKnown RBP12.3□□□□□ -0.44
LIMK1-201ENST00000336180 MAPRE2Q15555 327 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 SYTL3Q4VX76 610 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 RAET1GQ6H3X3 334 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 ACAT2Q9BWD1 397 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 DLGAP4Q9Y2H0 992 aa12.3□□□□□ -0.44
LIMK1-201ENST00000336180 TCF20Q9UGU0 1960 aaKnown RBP12.29□□□□□ -0.44
LIMK1-201ENST00000336180 SGTAO43765 313 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 BCAS2O75934 225 aaPredicted RBP12.29□□□□□ -0.44
LIMK1-201ENST00000336180 PDYNP01213 254 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 ACADSP16219 412 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms