RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SLC16A5O15375 505 aa20.98■□□□□ 0.95
TPM1-204ENST00000334895 DLX3O60479 287 aa20.98■□□□□ 0.95
TPM1-204ENST00000334895 CFIP05156 583 aa20.98■□□□□ 0.95
TPM1-204ENST00000334895 BDKRB1P46663 353 aa20.98■□□□□ 0.95
TPM1-204ENST00000334895 HNRNPKP61978 463 aaKnown RBP eCLIP20.98■□□□□ 0.95
TPM1-204ENST00000334895 TGFBIQ15582 683 aa20.98■□□□□ 0.95
TPM1-204ENST00000334895 CCSMST1Q4G0I0 132 aa20.98■□□□□ 0.95
TPM1-204ENST00000334895 DUS1LQ6P1R4 473 aaKnown RBP20.98■□□□□ 0.95
TPM1-204ENST00000334895 ZYG11AQ6WRX3 759 aa20.98■□□□□ 0.95
TPM1-204ENST00000334895 GPSM1Q86YR5 675 aa20.98■□□□□ 0.95
TPM1-204ENST00000334895 ZNF548Q8NEK5 533 aaPredicted RBP20.98■□□□□ 0.95
TPM1-204ENST00000334895 CEP76Q8TAP6 659 aa20.98■□□□□ 0.95
TPM1-204ENST00000334895 RDH11Q8TC12 318 aa20.98■□□□□ 0.95
TPM1-204ENST00000334895 TFGQ92734 400 aaPredicted RBP20.98■□□□□ 0.95
TPM1-204ENST00000334895 OR52A4PA6NMU1 304 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 SDC3O75056 442 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 PIAS2O75928 621 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 C1orf105O95561 183 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 CPA3P15088 417 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 SLC23A3Q6PIS1 610 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 UNC5DQ6UXZ4 953 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 MBOAT1Q6ZNC8 495 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 TAF8Q7Z7C8 310 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 SFTPA2Q8IWL1 248 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 PHC3Q8NDX5 983 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 LMX1AQ8TE12 382 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 C12orf66Q96MD2 445 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 ELF4Q99607 663 aaPredicted RBP20.97■□□□□ 0.95
TPM1-204ENST00000334895 PAIP2Q9BPZ3 127 aaKnown RBP20.97■□□□□ 0.95
TPM1-204ENST00000334895 ARRDC1-AS1Q9H2J1 176 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 PARVBQ9HBI1 364 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 INTS9Q9NV88 658 aaKnown RBP20.97■□□□□ 0.95
TPM1-204ENST00000334895 UCKL1Q9NWZ5 548 aa20.97■□□□□ 0.95
TPM1-204ENST00000334895 IFRD1O00458 451 aaPredicted RBP20.96■□□□□ 0.95
TPM1-204ENST00000334895 BPGMP07738 259 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 F3P13726 295 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 KCNA4P22459 653 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 ALDH3A1P30838 453 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 MPLP40238 635 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 RXRGP48443 463 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 CCDC6Q16204 474 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 RPE65Q16518 533 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 ZNF423Q2M1K9 1284 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 TRIM61Q5EBN2 209 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 HHATQ5VTY9 493 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 RABEPKQ7Z6M1 372 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 OR5AR1Q8NGP9 310 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 FOPNLQ96NB1 174 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 SMOC1Q9H4F8 434 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 RDH14Q9HBH5 336 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 SPASTQ9UBP0 616 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 ASF1AQ9Y294 204 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 WDR91A4D1P6 747 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 A8MT66 165 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 SUPT3HB4E1H0 165 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 POLR3GO15318 223 aaPredicted RBP20.96■□□□□ 0.95
TPM1-204ENST00000334895 FFAR2O15552 330 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 KLK8O60259 260 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 SUPT3HO75486 399 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 ENO2P09104 434 aaPredicted RBP20.96■□□□□ 0.95
TPM1-204ENST00000334895 MYL2P10916 166 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 MAPK9P45984 424 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 ELOCQ15369 112 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 LAIR1Q6GTX8 287 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 FRA10AC1Q70Z53 315 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 ASCL5Q7RTU5 278 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 C10orf107Q8IVU9 208 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 IMP3Q9NV31 184 aaKnown RBP20.96■□□□□ 0.95
TPM1-204ENST00000334895 NUDT4Q9NZJ9 180 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 ZNF624Q9P2J8 865 aaPredicted RBP20.96■□□□□ 0.95
TPM1-204ENST00000334895 CIDEBQ9UHD4 219 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 SLC6A14Q9UN76 642 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 PCDHGA5Q9Y5G8 931 aa20.96■□□□□ 0.95
TPM1-204ENST00000334895 PRAMEF33A0A0G2JMD5 474 aa20.95■□□□□ 0.94
TPM1-204ENST00000334895 NCF1BA6NI72 391 aaPredicted RBP20.95■□□□□ 0.94
TPM1-204ENST00000334895 SYCE1LA8MT33 242 aa20.95■□□□□ 0.94
TPM1-204ENST00000334895 NCF1CA8MVU1 366 aaPredicted RBP20.95■□□□□ 0.94
TPM1-204ENST00000334895 AQP9O43315 295 aa20.95■□□□□ 0.94
TPM1-204ENST00000334895 CATP04040 527 aaKnown RBP20.95■□□□□ 0.94
TPM1-204ENST00000334895 NCF1P14598 390 aaPredicted RBP20.95■□□□□ 0.94
TPM1-204ENST00000334895 CYP2A7P20853 494 aa20.95■□□□□ 0.94
TPM1-204ENST00000334895 ATP5F1P24539 256 aaPredicted RBP20.95■□□□□ 0.94
TPM1-204ENST00000334895 RPIAP49247 311 aa20.95■□□□□ 0.94
TPM1-204ENST00000334895 BNIP3Q12983 259 aa20.95■□□□□ 0.94
TPM1-204ENST00000334895 GRB7Q14451 532 aa20.95■□□□□ 0.94
TPM1-204ENST00000334895 HLA-BQ31612 363 aa20.95■□□□□ 0.94
TPM1-204ENST00000334895 FBXO15Q8NCQ5 510 aaPredicted RBP20.95■□□□□ 0.94
TPM1-204ENST00000334895 PATE1Q8WXA2 126 aa20.95■□□□□ 0.94
TPM1-204ENST00000334895 OXSMQ9NWU1 459 aa20.95■□□□□ 0.94
TPM1-204ENST00000334895 OGFRQ9NZT2 677 aa20.95■□□□□ 0.94
TPM1-204ENST00000334895 MID2Q9UJV3 735 aa20.95■□□□□ 0.94
TPM1-204ENST00000334895 CABIN1Q9Y6J0 2220 aa20.94■□□□□ 0.94
TPM1-204ENST00000334895 YY2O15391 372 aa20.94■□□□□ 0.94
TPM1-204ENST00000334895 GUCA1CO95843 209 aa20.94■□□□□ 0.94
TPM1-204ENST00000334895 MTHFD1P11586 935 aaKnown RBP20.94■□□□□ 0.94
TPM1-204ENST00000334895 GUCY1A3Q02108 690 aa20.94■□□□□ 0.94
TPM1-204ENST00000334895 PFKFB4Q16877 469 aa20.94■□□□□ 0.94
TPM1-204ENST00000334895 ZXDCQ2QGD7 858 aaPredicted RBP20.94■□□□□ 0.94
TPM1-204ENST00000334895 PLA2G2CQ5R387 149 aa20.94■□□□□ 0.94
TPM1-204ENST00000334895 IYDQ6PHW0 289 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms